LncRNA Gene

ZFLNCG03171

Basic Information

Chromesome: chr5

Start: 22227554

End: 22229001

Transcript: ZFLNCT04877 ZFLNCT04878

Known as:

Genome Browser
Express profile Download
Express in top 10 samples
Sample Tissue Condition FPKM
SRR800045 muscle normal 178.65
SRR800037 egg normal 97.08
SRR1035237 liver transgenic UHRF1 95.28
SRR1035984 13 hpf normal 86.16
SRR1035981 13 hpf rx3+/+ or rx3+/- 85.61
SRR748488 sperm normal 81.02
SRR1035978 13 hpf rx3-/- 65.77
SRR1562533 testis normal 63.91
SRR1004789 larvae impdh2 morpholino 52.88
SRR941753 posterior pectoral fin normal 48.79
Express in tissues
Correlated coding gene Download
gene correlation coefficent
lamtor1 0.75
LOC100535417 0.58
si:dkey-159f12.2 0.57
nr5a1a 0.56
LOC101883861 0.55
trim35-39 0.54
v-fbpl 0.54
tmem37 0.53
zgc:64065 0.53
zgc:103755 0.52
Gene Ontology Download
GO P value
GO:0032439 9.24e-04
GO:0030728 1.85e-03
GO:0043401 2.16e-03
GO:0009755 2.57e-03
GO:0032008 3.69e-03
GO:0001919 4.61e-03
GO:0042632 6.45e-03
GO:0055092 6.45e-03
GO:0010604 6.57e-03
GO:0031325 7.18e-03
GO:0032044 1.85e-03
GO:0071986 4.61e-03
GO:0005622 6.49e-03
GO:0031902 1.10e-02
GO:0045121 1.65e-02
GO:0098857 1.65e-02
GO:0008023 1.92e-02
GO:0090575 3.19e-02
GO:0010008 3.72e-02
GO:0044798 3.72e-02
GO:0003707 2.27e-03
GO:0008270 7.88e-03
GO:0046914 1.52e-02
GO:0046872 1.79e-02
GO:0043169 1.97e-02
GO:0043167 2.67e-02
GO:0005496 3.10e-02
GO:0003676 3.83e-02
GO:0004879 4.52e-02
GO:0098531 4.52e-02
KEGG Pathway Download
KO P value
ko04011 2.19e-02
ko05130 3.17e-02
ko04370 3.17e-02
ko05131 3.38e-02
ko05212 3.42e-02
ko05120 3.78e-02
ko05211 3.94e-02
ko05132 4.03e-02
ko05100 4.07e-02
ko04520 4.23e-02
Conservation
Zebrafish lncRNA Transcript Human lncRNA Transcript Mouse lncRNA Transcript Methods
ZFLNCT04878 ENST00000405336; NONHSAT113234; ENSMUST00000025669; Direct blastn
OMIM

OMIM of this lncRNA gene hava does not exist!

Sequence Download
>ZFLNCG03171
CGAGTTTAGTAGTAATAATAGATGCAGGCTATTTTGTTTATTACAACCTCTGTAAGGAAATAAACCACAC
AACTTTTCATCAGTCACATATAGAGTGGTTGACGGTGACGGTCTGTAAATAAGACCATTAATTTCGAGCT
TCAGCCAATGTCTCCTTCTCATCCTTCTGTTTGAGCCTATAGTCTGCTAATGCAGCCTTGATTGCATCCT
CTGCAAGCACTGCCAGATAAAAAAACAAATAATTATGAATTCTGTGACTGTGCATATTTTTGACACCCCT
TTCCCCAATGTGCTTGCAGACCAACTTACTAGAACAATGCAGTTTGACTGGTGGAAGACAAAGTTCTTTG
GCAATCTCTGTGTTTTTGATTTTCAGGGCTTCATCAATCTGCACACGAAACAGAGAACATTACAATGTGG
GAGGAAATGCTTGAGAAAACAAATTTAGAGCAAGATGAGATCATCTCACTGTGAATTTGTGCAATGGCCT
GAATCACAATGACTCACCGATTTCCCCTTCACCCACTCTGTGGCCAGAGAGCTGGAAGCAATGGCAGAGC
CACAGCCAAAGGTTTTGAATCTGGCATCTATTATTTTTCCATTCTCATCCACCTGAATCTGTCAAACACA
TTGCCAACACGCATAAAAGAGATTATTTATATATAGAAGTGATTGTATTATTAATATACAAGCAGTCAAT
ATTTGAAGCGGATCTAAAAGTTTATCAAAATTGTAATAAGACACAAAAATGTGTTAGTTTTAGACCTGTT
TCATAACTTCATACCTGTAGTTTCATTACATCCCCACATGCGGGTGCACCTACTAAACCCGTTCCCACGT
TCTTTGCGTTCTTGTCCAAGGAACCAACATTTCTGGGGTTTTCATAGTGGTCCACAACCTTTAGAGAAAA
GTAAAATATGTTATACCACTAAATCACTTCATTTGAGGTGAAGTTGGTTTTATATTCGCACATTCATTCA
GTGACAATGTAGGATACGTGATCCCTATATTGTCTACCGCAGAATATTCTGTCTGAAATTACAGAAGTAT
TTCTTAAAAACAATTAGCACTATTTGACTGCATGTGAACAATGTACTTTGATAGTCATCGGCTGCTAATA
TGATTTCTCTATTAAGAATTTGTAAAGACTACTTCTCTGAAATTATGCTTTTAAGGAGAAAGTCTGAATG
TGTAAATATAAAATTAACTTTACCTCAATATGACTAAAGCATGTGAATATGTGCCCTTGCTTTATAATGA
CACTGACCTTCATAATAAATAGAATAAAAAAACTGAACTGTGAACTTACAAAAGTAATACTACCAATAAT
AAAATGTTTATTTAACGTTACCTATGGCACAAGAAGAGTGATGTTAAAAGACACACCTCTAGTGAGTTTG
TAGGACAGTTACACAAGTGCATTATTTATCTAACCGTAAATATGTAT