LncRNA Gene

ZFLNCG08309

Basic Information

Chromesome: chr15

Start: 822336

End: 825869

Transcript: ZFLNCT12790

Known as:

Genome Browser
Express profile Download
Express in top 10 samples
Sample Tissue Condition FPKM
SRR800037 egg normal 40.70
SRR372793 shield normal 26.50
SRR658533 bud normal 26.20
SRR658535 bud Gata5 morphant 25.69
SRR514030 retina id2a morpholino 24.66
SRR658539 bud Gata5/6 morphant 22.95
SRR658537 bud Gata6 morphant 22.29
SRR372796 bud normal 21.60
SRR514028 retina control morpholino 19.65
SRR658541 6 somite normal 18.20
Express in tissues
Correlated coding gene Download
gene correlation coefficent
zgc:174624 0.76
zgc:171599 0.72
zgc:174708 0.70
si:dkey-50i6.6 0.70
zgc:174650 0.69
zgc:173575 0.69
LOC557514 0.68
si:dkey-20i20.5 0.67
si:dkey-4c15.5 0.67
si:dkey-1b17.2 0.67
Gene Ontology Download
GO P value
GO:0006397 2.16e-11
GO:0008380 2.30e-11
GO:0016071 2.46e-11
GO:0044699 2.24e-10
GO:0006396 3.24e-10
GO:0016070 3.12e-09
GO:0090304 1.78e-08
GO:0006139 6.38e-07
GO:0007165 1.29e-06
GO:0000956 1.48e-06
GO:0005634 1.25e-10
GO:0031224 1.87e-10
GO:0044425 2.18e-10
GO:0016020 2.25e-10
GO:0016021 2.87e-10
GO:0044428 2.89e-10
GO:0005575 2.93e-09
GO:0005681 1.46e-08
GO:0044451 1.75e-08
GO:1990904 9.83e-07
GO:0043169 9.18e-11
GO:1901363 1.22e-10
GO:0003676 1.90e-10
GO:0046872 2.24e-10
GO:0097159 2.35e-10
GO:0005488 9.57e-10
GO:0003723 1.02e-07
GO:0043168 1.80e-06
GO:0003824 1.91e-06
GO:0043167 6.97e-06
KEGG Pathway Download
KO P value
ko03040 1.42e-15
ko03015 4.11e-09
ko03013 6.98e-05
ko03022 4.90e-04
ko03018 5.41e-03
ko03008 2.90e-02
Conservation
Zebrafish lncRNA Transcript Human lncRNA Transcript Mouse lncRNA Transcript Methods
ZFLNCT12790 ENST00000596451; ENST00000500612; ENST00000597330; ENST00000446262; ENST00000597158; ENST00000594562; ENST00000599190; ENST00000605144; ENST00000567341; ENST00000363309; ENST00000456718; ENST00000469492; ENST00000591177; ENST00000593270; ENST00000595422; ENST00000598051; ENST00000594379; ENST00000383942; ENST00000612939; ENST00000592087; ENST00000594865; ENST00000600253; ENST00000595010; ENST00000619318; ENST00000600329; rna119528; rna122103; rna122189; rna101309; rna123184; rna119562; rna119534; rna122291; rna118615; rna122095; rna122192; rna101310; rna123366; rna122191; rna122190; NONHSAT067569; NONHSAT180384; NONHSAT066009; NONHSAT066004; NONHSAT143480; NONHSAT067510; NONHSAT067564; NONHSAT066052; NONHSAT068239; NONHSAT179928; NONHSAT180013; NONHSAT066011; NONHSAT066053; NONHSAT179918; NONHSAT066006; NONHSAT068246; NONHSAT179932; NONHSAT180014; NONHSAT067638; NONHSAT180621; NONHSAT180395; NONHSAT068440; NONHSAT147961; NONHSAT067500; NONHSAT067570; NONHSAT180564; NONHSAT068446; NONHSAT219049; NONHSAT067497; NONHSAT067503; NONHSAT066145; NONHSAT180382; NONHSAT068313; NONHSAT067639; NONHSAT066010; NONHSAT067498; NONHSAT068255; NONHSAT067499; NONHSAT067509; NONHSAT179716; NONHSAT147960; NONHSAT068312; NONHSAT067492; NONHSAT143481; NONHSAT179931; NONHSAT068305; NONHSAT147962; NONHSAT066071; NONHSAT179719; NONHSAT067501; NONHSAT067637; NONHSAT067508; NONHSAT068244; NONHSAT068439; NONHSAT067532; NONHSAT173232; NONHSAT179923; NONHSAT068245; NONHSAT067693; NONHSAT068238; NONHSAT180552; NONHSAT067565; NONHSAT068259; ENSMUST00000180846; ENSMUST00000205272; rna39617; rna39612; NONMMUT054960; NONMMUT068237; NONMMUT126426; NONMMUT068232; NONMMUT126427; NONMMUT059839; NONMMUT068239; NONMMUT124878; NONMMUT009632; NONMMUT060530; NONMMUT029150; NONMMUT068235; NONMMUT126588; NONMMUT126529; NONMMUT053727; NONMMUT059981; NONMMUT124703; NONMMUT068236; NONMMUT060538; NONMMUT126530; NONMMUT068229; NONMMUT132117; NONMMUT060539; NONMMUT124678; NONMMUT029153; NONMMUT060997; NONMMUT090167; NONMMUT068226; NONMMUT068238; NONMMUT126528; Collinearity with conserved coding gene
OMIM

OMIM of this lncRNA gene hava does not exist!

Sequence Download
>ZFLNCG08309
CGTCATGAGGCTGTGCCGCGCTGCTGCTTTCCTTGTGATGAAAGGTTTGCACTTTTAATCATTTTAGTTG
TTAAGATAAATATATGTTGTTTAGAAATGTGTATATGCATTAAAATATAAGTAATACTAATCAATTCATT
ATTAAGTGTGATGTTATGTCGTATCCAACGTGTGTTAACATTCGTTTAAGTGTAAAACAAAAGAGAAACG
GAAAAGCTGCGTCTCATTATATGTTGTGAATCAGTTTATTATCAACAGTATTCAGTTTAGCAAGTGATGA
AGCACGTCAGCTGAGTCTAATGATGCTGAACACGATCTGAATCGCCACAGTTTAATACTGAAACCCGACT
CCTGGACACACCGCACTCCCGATCGCGGGCACGCGCTTTATTTGTTTACCATGAGACTTTTATAAATCAC
TTTTCCAGTTAGCGCCTGTAATTGGTCGTTTTACACTTGCAAATATACCAAATAAACGTTATTATTTCTT
TCTTCCAATTGACCCTGCATTATATTATCATATATAACTAAATGATTCATGTGTATTATTTGATTTAATG
ACTATTTAATGCTAATGCTAGTTGTGATTAATTGGTTGATATTGTCTCCATCTAGCTCCCTCACTAGTGC
ACTGACTACTGAACTAGAGAGCTGATGGAGACTGGATTTGTGTCTTTCTGTTCATTATTCTGATCTTCAA
CAGGACAAACACAGAAGATCTGCTGAAGCGACTGAGCTCAGACTGTTATAAAGATGGCGTTTATTAAAGA
GGAGAGTGTAGACATAAAGATTGAAGAAACATTCACAGTCAAACATGAAGAGACTGAAGAAGCTTTCAGA
GTCAAACATGAAGATCCTGAGGAGCAAACAGGTTGGTTTTTCTATAAACGGGATCATAAAAGGAATATTC
AAAAAGCAGCTCATTTAAACACAAAATAATCCTATTAATGATGTCCATGTAAACATAGTCTGTTTTTATT
AGTCGTCAGTTATTTTGATACATCAGCACATATAAATACAAACTTAGTCATACAGTGGGGAAGTAAAAAA
TAATAAAAGGGGGAAATATACAAACAAGTAAACATGCTAATACAGTCAGGCAAGGACCAAAAATGTATAC
CATAGAATAGAAAATCAGGAGAGATTATTGATGCGTTGCCAAAAAGGTGTTCATAGCTGCCGGAAGTCAT
CTGACTTTTGATATATATCATAAGTGAGTTTCTCAAGTGGAAATCAAGCACATACTTGAGACAACCACAT
TTTTAAGGAAGGCACCTGAGGAGATGACCACAATAAAAGTTTACATTTCTTTGCCAGATAAACCAAAATT
AAAAACAGATTTTCGGCGTGAGGGCCCAACACATTCTCTACTCCATCATACAACAAATGCAATTTTAGAG
AAAAACTGAATTTTATCTGAAAGAGTCCGCGTATAAAATTATGTATTTTCTTCCAAAACGAGATGACTTT
AGCCCCTTTCACACAGTGATACCGGTAAATATCTGGAAAATTTCCGGAACTACTTTACCAGTAAATTCAA
AAAAGTGCTGTTCACACAGGCGAGGACGTTACGGAATTTTTCCAGAAAAGAGCATTCACACATCCATTCC
AAAATGCCGGTAAATTCTGACATCATTAACCAGAAATGAGCTCTAAACAGCTGCGCTTGTGTTTGTAAAC
ATTTGACTACATTACAAACTCTTCGGATGGATCAGTATTGAGTACAACTCTAATGAAAACATAGAAAAAC
ACTTTCGCATGTCGAGATGTTCATGATATGTGTGTGTGCTGGCGCTATGGGCGCTCATGGGCACACGCAA
AGCTTGAAGGTAAACAAACAACGGATTATCATAAACATTTTATCGATAATTATTTACACAGTTAGCATTA
AGAAGGAACATAGAAACATTATCTGACTAACATCTAGCAGCTAAATGTGTCTGGAAAAATATTCAAAGGC
TTTTATTCTCATAAACCGCGCCCACGTGAATGCGTCTGACTGTTGTGATTGGCTAAAGCAGACGTCTCAC
GTCAGCCCGTTCTAGACGTGGACGCGCTTATTACGGCAATCTTCCTTCTGCATTCACACAGCGCAGCATT
CCGGCAAATTACCGGTAATGTTACAACTTCTCTTTCCGGAAAAAAGCCAGAACGAATTTACCGGTATTTT
CAAAAAGGGCCTGTTCACACATACAGACCTTTCCGGAAAATTGCCGGTAATTTTCCGGAAAGGTCTGTAT
GTGTGAAAGGGGCTTTTGTCACAATACCAGAAACAGTGAAGGAATGTCTTTACCTTTTTTTTGCAGTTAA
AACAAAGATCAGAGGAGTTTCTATAAATCTTTTACAGACGCAAGGGTGTAAGATAAACTCTGTTAATGAA
TCTATAATTGAGCTCATGAACACCCAATGAAGTACATTTAGAATACAAGTTGTTACATATTTCAGACCAA
TCTGTATCTTCAATTTCGTGACCTAAGGGCGTACTCACACTATGCCATCCGTACCGTGCCCAGGTCGTTT
CCCGGATCGTTTGAGAAGCGAGTGCGCTGAATCGGGCTCAAGCACGGTTCCCTAGGCCGGCCCTGGCCCG
GTTGGAAGAGGTGTGCCTGAGCGCGGTTCACTTGGGCTTTGGTACGCTTGTGTGTGAGTGCAAAACACGC
CAAAGCCCAAAACTGAAAGCGAGACGTGACTTTAAGGGACTGTTTCATATGGATTTATTAATCATTCTTA
CTGTTCAGTGAACGCAAACTGCCGTAGTTTATTAAAGACGCAAACCCCTCACTGCACCACAGCTGCACCT
TCAGCAGACCTCCTCATTCCTGCAGCACGAGAGCTTTATGATTGTTTATAAGCAGCAAAAGTGGCGGATC
TGTTCGGCGAAATATCTGACTGCGTGTCACCGCATCCCTAAGGACTGCTTGGCGAAATATTTGACGGCAT
ATCAAACGACTGAAACGATATAACTAGAGAAATCTCCACGGTGCTGCTGAGTGAGAGAGCGCTTCTCACT
GAACAGCGCAGCAGTAAGCGTGCCGAAGCCCGTTTGTGGTGTGAGCGCGGGCCGTCGTGGGAGACGGAAG
GGGGGACGAGTGTGCTTTGGCCCGGTTCGAGGCAACTGTACCTAGTGTGAGTACGGCCTAAATCTTTTTC
CCACACACACTTCAAAAAACATAGTCATTTTTAATATTTTGTGATGTGGTATGTTGGAATTGTAACACTG
CTGGCGTTGTGTTTTTTCTTTTCATCTCCACAGAAGACGCGATGCCACTCAAAGTGGGAGAATGCCGTGA
ATTCAGTCCTGGAGACAAATCAGAACAGACAAAAACCTCACACAAAACAGCCTGGAATAGCATATTTAAC
ACCTGCCATCAGTGTGGAAAGACTTTCAATCGGAAGCAGTACTTTATAGAACACATGACGCTTCACACTG
GAGAAAAGCCTTACACCTGCCAACAGTGTGGAAAGAGCTTCACCTGGAAACAAAACCACACAATCCATAT
GAGGATTCACAGTGGAGAGAAGCCTCACACCTG