LncRNA Gene

ZFLNCG08597

Basic Information

Chromesome: chr15

Start: 30767912

End: 30768497

Transcript: ZFLNCT13245

Known as:

Genome Browser
Express profile Download
Express in top 10 samples
Sample Tissue Condition FPKM
SRR1205160 5dpf transgenic sqET20 and GFP+ 6.82
SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 3.71
SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 3.53
SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 3.24
SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 0.91
SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 0.64
SRR1205154 5dpf transgenic sqET20 0.61
SRR1565809 brain normal 0.59
SRR776508 embryo miR-146 knockdown 0.57
SRR891510 muscle normal 0.48
Express in tissues
Correlated coding gene Download
gene correlation coefficent
barhl1b 0.54
ca4a 0.54
si:ch211-154o6.4 0.53
LOC101885864 0.52
slc1a6 0.52
or102-3 0.52
LOC567521 0.52
dvl1b 0.52
shox 0.52
atp1b4 0.52
Gene Ontology Download
GO P value
GO:0007623 5.09e-04
GO:0006730 7.85e-04
GO:0048511 9.44e-04
GO:0030186 1.35e-03
GO:0022410 2.70e-03
GO:0060004 2.70e-03
GO:0060005 2.70e-03
GO:0045187 2.70e-03
GO:0042749 2.70e-03
GO:0050957 2.70e-03
GO:0090533 9.42e-03
GO:0005890 9.42e-03
GO:0098533 1.08e-02
GO:1904949 1.08e-02
GO:0005924 1.74e-02
GO:0005925 1.74e-02
GO:0030055 1.74e-02
GO:0030672 2.40e-02
GO:0099501 2.40e-02
GO:0031225 2.67e-02
GO:0004089 1.34e-04
GO:0005310 5.51e-04
GO:0016836 1.24e-03
GO:0016499 1.35e-03
GO:0016835 2.12e-03
GO:0015293 5.38e-03
GO:0001968 6.73e-03
GO:0005313 6.73e-03
GO:0015172 6.73e-03
GO:0046943 9.33e-03
KEGG Pathway Download
KO P value
ko00910 2.35e-04
ko04964 5.53e-04
ko04724 7.04e-04
ko05033 2.06e-03
ko04080 1.29e-02
ko04020 4.09e-02
ko04024 4.49e-02
ko04978 4.89e-02
Conservation
Zebrafish lncRNA Transcript Human lncRNA Transcript Mouse lncRNA Transcript Methods
ZFLNCT13245 ENST00000618350; NONHSAT108518; NONHSAT108520; ENSMUST00000118807; ENSMUST00000122434; ENSMUST00000173709; ENSMUST00000172948; ENSMUST00000205947; ENSMUST00000173971; ENSMUST00000192435; ENSMUST00000174677; ENSMUST00000054711; ENSMUST00000172563; ENSMUST00000172477; ENSMUST00000120755; ENSMUST00000080251; ENSMUST00000131038; ENSMUST00000118805; ENSMUST00000117180; ENSMUST00000203299; ENSMUST00000117553; ENSMUST00000165784; ENSMUST00000204790; ENSMUST00000121186; ENSMUST00000143255; ENSMUST00000173218; ENSMUST00000120884; ENSMUST00000120386; ENSMUST00000122047; ENSMUST00000117954; ENSMUST00000131512; ENSMUST00000117290; ENSMUST00000204141; ENSMUST00000117238; ENSMUST00000204536; ENSMUST00000087769; ENSMUST00000129056; ENSMUST00000122018; ENSMUST00000119741; ENSMUST00000120602; ENSMUST00000124021; ENSMUST00000181346; ENSMUST00000118801; ENSMUST00000140414; ENSMUST00000203614; ENSMUST00000203108; ENSMUST00000201362; ENSMUST00000115991; ENSMUST00000126779; ENSMUST00000075798; ENSMUST00000119283; ENSMUST00000122179; ENSMUST00000120418; ENSMUST00000122248; ENSMUST00000117794; ENSMUST00000126060; ENSMUST00000134011; ENSMUST00000202918; ENSMUST00000118403; ENSMUST00000120109; ENSMUST00000190505; ENSMUST00000064830; ENSMUST00000117184; ENSMUST00000185802; ENSMUST00000173181; ENSMUST00000122238; ENSMUST00000117753; ENSMUST00000119267; ENSMUST00000174446; ENSMUST00000121306; ENSMUST00000119802; ENSMUST00000174168; ENSMUST00000119132; ENSMUST00000121665; ENSMUST00000118378; ENSMUST00000174813; ENSMUST00000118682; ENSMUST00000198495; ENSMUST00000122338; ENSMUST00000118137; ENSMUST00000174025; ENSMUST00000118702; rna94152; rna24352; rna34930; rna46815; rna24354; rna10785; rna21764; rna81480; rna24353; rna75719; rna34931; rna94151; rna46816; NONMMUT089370; NONMMUT126344; NONMMUT125951; NONMMUT036922; NONMMUT038368; NONMMUT029602; NONMMUT068661; NONMMUT132324; NONMMUT038357; NONMMUT101005; NONMMUT083033; NONMMUT020810; NONMMUT080461; NONMMUT029607; NONMMUT102035; NONMMUT105912; NONMMUT064149; NONMMUT020720; NONMMUT125938; NONMMUT125924; NONMMUT029603; NONMMUT076788; NONMMUT125937; NONMMUT063050; NONMMUT083035; NONMMUT127587; NONMMUT125919; NONMMUT083036; NONMMUT075997; NONMMUT047021; NONMMUT009936; NONMMUT063041; NONMMUT038337; NONMMUT109322; NONMMUT102078; NONMMUT056652; NONMMUT125936; NONMMUT033947; NONMMUT126345; NONMMUT063043; NONMMUT038329; NONMMUT039095; NONMMUT125920; NONMMUT125552; NONMMUT029613; NONMMUT029615; NONMMUT029626; NONMMUT009940; NONMMUT122147; NONMMUT123687; NONMMUT083038; NONMMUT083037; NONMMUT009939; NONMMUT127588; NONMMUT089371; NONMMUT029627; NONMMUT063044; NONMMUT038332; NONMMUT127602; NONMMUT125948; NONMMUT039089; NONMMUT038369; NONMMUT033981; NONMMUT010657; NONMMUT038331; NONMMUT062603; NONMMUT063042; NONMMUT094396; NONMMUT038323; NONMMUT016569; NONMMUT016567; NONMMUT085607; NONMMUT029606; NONMMUT038354; NONMMUT038366; NONMMUT102034; NONMMUT010656; NONMMUT125553; NONMMUT029605; NONMMUT063085; NONMMUT134106; NONMMUT063128; NONMMUT038330; NONMMUT083034; NONMMUT016570; Collinearity with conserved coding gene
OMIM

OMIM of this lncRNA gene hava does not exist!

Sequence Download
>ZFLNCG08597
ACACACACACACACACACACACACACACCAAACACACACACACACACACACACAAAAACACACAAAGGAT
TTGTCACATATAAACATCATGTGGTCACGATGATTTACTGCTTCAAAACAAAAGAGATTAAAGATGCATT
AAAAAGGAAAATGAGACACAAGAGAGTCAGCATGAAAGTTAAAATGATGTAATGCTTTACTATAATATAG
TGTCATTCATGCATGCCTCGTTTTTTTCTATTTCTGCAACAAAGGTTGTACATTTTTGCAATTAATAGAC
ATAAATGCAAAAATAAATGTTTAAAAGTATGCTATACTTTAATAATGAAAAATAGAAATGGGCTTTTTAT
CTCACATTTTCTTTTTCACTTGTATTATTAGAGTGCAGGCTACAGTGAAGTACTACTAAAATGTTTTATA
CTTTGAACCTTACTTTGAAATTTTTAGCTTGTTTTTAGATTGTTATGATCAGATGAATGGCATTTCATTT
AGTTCATTTATTTCATTGTTTTTATAATTGTGTGTTATTGAAGTGTGTAGGGATATTCTTCTGAGATAGC
TTTATAATGTTTGTTGTTTTAGTTG