LncRNA Gene

ZFLNCG10838

Basic Information

Chromesome: chr20

Start: 2767665

End: 2768929

Transcript: ZFLNCT16800

Known as:

Genome Browser
Express profile Download
Express in top 10 samples
Sample Tissue Condition FPKM
SRR658537 bud Gata6 morphant 625.10
SRR514030 retina id2a morpholino 297.13
SRR658533 bud normal 277.32
SRR1021215 sphere stage Mzeomesa 247.20
SRR1035984 13 hpf normal 232.86
SRR1021213 sphere stage normal 228.78
SRR658545 6 somite Gata6 morphant 209.14
SRR797911 embryo prdm1-/- 207.68
SRR658539 bud Gata5/6 morphant 207.12
SRR797908 embryo normal 204.20
Express in tissues
Correlated coding gene Download
gene correlation coefficent
zgc:174651 0.63
lamtor1 0.62
helq 0.62
zcchc17 0.60
supt4h1 0.58
ppp6r3 0.58
acbd3 0.57
slc35a4 0.56
zgc:194285 0.56
slc35d1a 0.56
Gene Ontology Download
GO P value
GO:1901991 9.49e-04
GO:1901988 9.49e-04
GO:0007093 2.47e-03
GO:0032439 2.56e-03
GO:0032196 2.56e-03
GO:0006313 2.56e-03
GO:0030174 2.56e-03
GO:2000040 2.56e-03
GO:0003402 2.56e-03
GO:1902593 3.01e-03
GO:0031515 5.11e-03
GO:0032044 5.11e-03
GO:0043527 7.66e-03
GO:0071986 1.27e-02
GO:0016580 1.27e-02
GO:0005868 1.78e-02
GO:0034399 1.78e-02
GO:0070822 2.78e-02
GO:0031902 3.03e-02
GO:0030286 4.26e-02
GO:0042799 5.11e-03
GO:0015165 5.11e-03
GO:0003941 5.11e-03
GO:0004534 5.11e-03
GO:0004794 5.11e-03
GO:0005338 7.66e-03
GO:0016841 7.66e-03
GO:0004693 1.02e-02
GO:0015215 1.02e-02
GO:0097472 1.02e-02
KEGG Pathway Download
KO P value
ko05220 2.78e-03
ko04110 7.90e-03
ko05206 1.16e-02
ko00900 2.31e-02
Conservation
Zebrafish lncRNA Transcript Human lncRNA Transcript Mouse lncRNA Transcript Methods
ZFLNCT16800 ENST00000434910; NONHSAT189279; ENSMUST00000191249; NONMMUT133020; Direct blastn
ZFLNCT16800 ENSMUST00000188747; NONMMUT133020; NONMMUT070330; NONMMUT070332; NONMMUT133021; NONMMUT070331; Collinearity with conserved coding gene
OMIM

OMIM of this lncRNA gene hava does not exist!

Sequence Download
>ZFLNCG10838
ACAATCATGAAATTCGCCCTGGCAAACACATTGGCGTGTGCATATCTGTGGCCAACAACAGACTCTTTGT
GGGCTCCATTCCCAAGAGCAAGACAAAAGAGCAGATTGTCGAGGAGTTCTCCAAAGTCACAGGTGAGCTT
TGCCTTGAAATGAAGCTGCATTCCTCGTGCTCGTCTGTCTCTTCTCAATTGGGATGATTTTGTGGAAGTA
GTGCATCTCCATACAATCAAAAAAAGGATGCAGTTAAAATAATGTTATCAATTTCCTGATTAATAACAAG
TAATTTCATTATTACTTGGAGTCACAAATAGTCCTATTTCTTATGCCTGAGTGATTTTAAAATCATGAAA
AATCACAGACATTTAAACCACATGCAGATGATGCATTATAATACTAATTCAGCATTGCGTGTATCCTGCG
ATGTGACTATTGTGAATGATCACATTGTACTAGCTTCATTGCTTTAAGATGTGCTTGTTGCTTTTGTTAG
AGGGTCTTACGGACGTGATCCTTTACCATCAGCCGGATGATAAGAAAAAGAACCGAGGCTTCTGCTTTCT
GGAGTACGAGGACCACAAGACTGCAGCGCAGGCTCGCCGTCGGCTGATGAGCGGGAAGGTGAAGGTGTGG
GGCAATCTGGTCACAGTGGAATGGGCTGACCCAATCGAGGATCCTGACCCAGAGGTCATGGCAAAGGTAT
GGCAGAACCGATCCACAGTGTTTGTGCTGTAATTTAAAGCTTTGAGGAACCATATTCACATTAGATCTCA
GATTTCTGGATGTTCGGATGATTAGTTGTATGAGCTGAAGTAGCAAACTGCTGATAGACAAAGTCAAAGT
TTGCAATGTTTATTTTGATTGATCACATTGCTCCTAGCAATATGCAGGTTAATCCATAGTTTTTTTTTCA
CCATTTGCAGGCTTCTAACATCATGATAAAGTAAAATGAAAACCACATTGCATTGTGTGCTCTCTTGGAA
GCTCACGTCATCTCATTTACTCCTAGGTCAAAGTGTTGTTTGTCAGGAACCTGGCCAACAGCGTTACTGA
GGAAATACTTGAAAAAGCCTTCGGCCAGTTTGGCAACCTGGAGCGAGTGAAGAAACTGAAAGACTACGCC
TTCGTCCACTTCAACGACAGAGACGGAGCGGTGAAGGTATGAAAACTGTGTGTGGAAGGTCTAAGGAGGA
AAGTGTGTGCTTAGTTGCTGTGTCTGACGGTGTGGATGCTCGCAGGCGCTGACTGAAATGAATGGTAAAG
AACT