sample tissue condition fpkm SRR372798 28 hpf normal 12.5133 SRR1708344 embryo MUTPS 11.2627 SRR1708346 embryo SIBPS 10.2447 SRR535926 larvae normal 10.0628 SRR527844 24hpf normal 9.392539999999999 SRR527840 24hpf normal 8.964160000000001 SRR1708343 embryo MUTAS 8.95629 SRR535890 larvae normal 8.89884 SRR749515 24 hpf eif3ha morphant 8.83111 SRR535913 larvae krox mut 8.79968 SRR527836 24hpf normal 8.668389999999999 SRR1004787 larvae impdh1a morpholino 8.6679 SRR372800 2 dpf normal 8.303289999999999 SRR527832 16-36 hpf normal 8.14364 SRR1004789 larvae impdh2 morpholino 7.8494 SRR535986 larvae nhsl1b mut 7.50144 SRR749514 24 hpf normal 6.97335 SRR038625 embryo traf6 morpholino 6.36487 SRR535978 larvae normal 6.28575 SRR038624 embryo traf6 morpholino and bacterial infection 6.0681400000000005 SRR519717 2 dpf FETOH treatment 6.03533 SRR1004788 larvae impdh1b morpholino 6.02727 SRR038627 embryo control morpholino 6.00296 SRR519737 2 dpf VD3 treatment 5.94034 SRR519747 6 dpf VD3 treatment 5.5488599999999995 SRR1004785 larvae normal 5.5292699999999995 SRR535943 larvae vangl mut 5.42511 SRR776508 embryo miR-146 knockdown 5.33195 SRR519752 7 dpf VD3 treatment 5.18265 SRR776507 embryo normal 5.0022400000000005 SRR065197 3 dpf U1C knockout 4.99432 SRR038626 embryo control morpholino and bacterial infection 4.9036 SRR527833 5 dpf normal 4.87185 SRR1708345 embryo SIBAS 4.8438 SRR519732 7 dpf FETOH treatment 4.53985 SRR776509 embryo Salmonella infected 4.52924 SRR1167763 embryo ptpn6 morpholino and bacterial infection 4.3357 SRR519742 4 dpf VD3 treatment 4.2945400000000005 SRR776510 embryo Salmonella infected and miR-146 knockdown 4.2847800000000005 SRR1004786 larvae control morpholino 4.1628 SRR1005530 embryo RPL11 morpholino 4.07702 SRR519727 6 dpf FETOH treatment 3.99188 SRR1291417 5 dpi injected marinum 3.87245 SRR1534350 larvae 5 ug/l BDE47 treatment 3.81578 SRR519722 4 dpf FETOH treatment 3.77566 SRR535847 larvae normal 3.57479 SRR535852 larvae hoxb1b mut 3.57363 SRR535850 larvae hoxb1b mut 3.5057699999999996 SRR726541 5 dpf infection with Mycobacterium marinum 3.48604 SRR535849 larvae normal 3.3500199999999998 SRR535848 larvae hoxb1b mut 3.29325 SRR1534351 larvae 500 ug/l BDE47 treatment 3.25248 SRR630463 5 dpf normal 3.1701200000000003 SRR630464 5 dpf injected epidermidis 3.03405 SRR535851 larvae normal 2.89451 SRR801555 embryo RPS19 morpholino 2.85642 SRR1291414 5 dpi normal 2.83945 SRR1534349 larvae DMSO vehicle 2.7692799999999997 SRR065196 3 dpf normal 2.7221599999999997 SRR372802 5 dpf normal 2.46237 SRR1523211 embryo control morpholino 2.26372 SRR831692 embryo normal 2.20735 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 2.19069 SRR1523214 embryo glut12 morpholino 2.1092 SRR726542 5 dpf infection with control 2.07216 SRR1167752 embryo normal 2.05231 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 2.0503299999999998 SRR726540 5 dpf normal 1.9839099999999998 SRR1342216 embryo norml 1.96918 SRR1167753 embryo bacterial infection 1.95725 SRR1167756 embryo mpeg1 morpholino 1.8204099999999999 SRR700537 heart Gata4 morpholino 1.77837 SRR942769 embryo myd88+/+ 1.72407 SRR1342218 embryo marco morpholino 1.6004200000000002 SRR942764 embryo myd88-/- 1.43052 SRR1167762 embryo ptpn6 morpholino 1.3494899999999999 SRR1342217 embryo infection with Mycobacterium marinum 1.32598 SRR633550 larvae exposed to hypoxia stress 1.25745 SRR633544 larvae exposed to cold stress 1.25385 SRR633516 larvae normal 1.1590799999999999 SRR1188156 embryo Control PBS 4 hpi 1.04197 SRR1188160 embryo Insulin 4 hpi 0.911331 SRR1188152 embryo Insulin 0.5 hpi 0.8282639999999999 SRR1028004 head normal 0.810074 SRR1188148 embryo Control PBS 0.5 hpi 0.767149 SRR610742 3 dpf express NICD 0.763215 SRR610740 3 dpf normal 0.747674 SRR610741 3 dpf express Ras 0.712518 SRR1005529 embryo control morpholino 0.685716 SRR801554 embryo control morpholino 0.684656 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 0.657231 SRR801556 embryo RPS19 and p53 morpholino 0.590066 SRR1104058 heart normal 0.483817 SRR594769 blood normal 0.462761 SRR1167757 embryo mpeg1 morpholino and bacterial infection 0.45596099999999995 SRR800046 sphere stage 5azaCyD treatment 0.389991 SRR594771 endothelium normal 0.28938800000000003 SRR1035984 13 hpf normal 0.219993 SRR1028002 head normal 0.195941 SRR514030 retina id2a morpholino 0.167739 SRR797917 embryo pbx2/4-MO and prdm1-/- 0.1668 SRR658543 6 somite Gata5 morphan 0.16356400000000001 SRR372796 bud normal 0.159485 SRR1028003 head normal 0.15535 SRR1048059 pineal gland light 0.15351099999999998 SRR592700 pineal gland normal 0.150748 SRR797914 embryo pbx2/4-MO 0.138194 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 0.12304100000000001 SRR1035978 13 hpf rx3-/- 0.11972999999999999 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 0.10665799999999999 SRR592701 pineal gland normal 0.106651 SRR700534 heart control morpholino 0.0950743 SRR658547 6 somite Gata5/6 morphant 0.0825446 SRR797911 embryo prdm1-/- 0.0817082 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 0.07452360000000001 SRR1035981 13 hpf rx3+/+ or rx3+/- 0.0721057 SRR658533 bud normal 0.06844589999999999 SRR658545 6 somite Gata6 morphant 0.0607798 SRR514028 retina control morpholino 0.05445980000000001 SRR658539 bud Gata5/6 morphant 0.052585 SRR592702 pineal gland normal 0.0525238 SRR1569495 embryo normal 0.0488169 SRR658535 bud Gata5 morphant 0.0481577 SRR592699 pineal gland normal 0.0468714 SRR527834 head normal 0.0425631 SRR1104059 heart kctd10 mut 0.0424047 ERR023144 brain normal 0.0408461 SRR1048061 pineal gland dark 0.0383921 SRR941749 anterior pectoral fin normal 0.0342213 SRR658541 6 somite normal 0.0337187 SRR1648856 brain normal 0.0307954 SRR1565811 brain normal 0.0305586 SRR1205154 5dpf transgenic sqET20 0.0304836 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 0.0291613 SRR1562532 spleen normal 0.026558699999999998 SRR797908 embryo normal 0.024799900000000003 SRR1299128 caudal fin Three days time after treatment 0.0237998 SRR1299129 caudal fin Seven days time after treatment 0.023558900000000004 SRR1647679 head kidney normal 0.0233903 ERR594417 retina normal 0.0223901 SRR1565813 brain normal 0.022312000000000002 SRR1565817 brain normal 0.0216657 SRR1205160 5dpf transgenic sqET20 and GFP+ 0.0211349 SRR658537 bud Gata6 morphant 0.020906 SRR1565809 brain normal 0.0201924 SRR1565819 brain normal 0.0183419 SRR1565815 brain normal 0.0173856 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.016366 ERR594418 retina transgenic flk1 and develop tumors 0.016089199999999998 SRR1565807 brain normal 0.0152011 SRR748488 sperm normal 0.0148345 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.011759200000000001 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 0.0113106 SRR941753 posterior pectoral fin normal 0.010049899999999999 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 0.00963357 ERR594416 retina transgenic flk1 0.00959405 SRR1648855 brain normal 0.00889026 SRR1565805 brain normal 0.00663104 SRR1621206 embryo normal 0.00291789 SRR1021213 sphere stage normal 0.00280342 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 1.28125e-06