sample tissue condition fpkm ERR023143 swim bladder normal 15.7534 SRR1299125 caudal fin Half day time after treatment 15.1297 SRR1299126 caudal fin One day time after treatment 12.5583 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 11.7276 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 10.5631 SRR1299127 caudal fin Two days time after treatment 9.81242 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 9.72893 SRR1039571 gastrointestinal diet 0.1 NPM 9.348230000000001 ERR023146 head kidney normal 8.76868 SRR372793 shield normal 8.37079 SRR1299129 caudal fin Seven days time after treatment 8.17848 SRR748489 egg normal 7.27457 SRR1299124 caudal fin Zero day time after treatment 7.209110000000001 SRR1205160 5dpf transgenic sqET20 and GFP+ 7.16447 SRR1299128 caudal fin Three days time after treatment 7.10884 SRR516134 skin male and 5 month 7.08356 SRR372796 bud normal 6.6329899999999995 SRR1562529 intestine and pancreas normal 6.047540000000001 ERR023145 heart normal 5.91948 SRR1291414 5 dpi normal 5.81734 SRR516133 skin male and 5 month 5.5431 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 5.31388 SRR1188152 embryo Insulin 0.5 hpi 5.30204 SRR1004786 larvae control morpholino 5.2790300000000006 SRR610740 3 dpf normal 5.0315900000000005 SRR1039573 gastrointestinal diet 0.75 NPM 4.96054 SRR658535 bud Gata5 morphant 4.88022 SRR658533 bud normal 4.75994 SRR516131 skin male and 5 month 4.72696 SRR658539 bud Gata5/6 morphant 4.59106 SRR797911 embryo prdm1-/- 4.54973 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 4.52555 SRR1167762 embryo ptpn6 morpholino 4.5141800000000005 SRR1188148 embryo Control PBS 0.5 hpi 4.43771 SRR1523211 embryo control morpholino 4.43095 SRR1562530 liver normal 4.40263 SRR516125 skin male and 3.5 year 4.40116 SRR516129 skin male and 5 month 4.31663 SRR1562533 testis normal 4.30947 SRR748491 germ ring normal 4.27578 SRR1188160 embryo Insulin 4 hpi 4.27516 SRR1167763 embryo ptpn6 morpholino and bacterial infection 4.27116 SRR1523214 embryo glut12 morpholino 4.26363 SRR749514 24 hpf normal 4.253480000000001 SRR797908 embryo normal 4.106240000000001 SRR1004789 larvae impdh2 morpholino 4.02061 SRR1048061 pineal gland dark 3.9370199999999995 SRR516130 skin male and 5 month 3.9356699999999996 SRR658545 6 somite Gata6 morphant 3.90827 SRR610742 3 dpf express NICD 3.8861800000000004 SRR516123 skin male and 3.5 year 3.8373 SRR516128 skin male and 5 month 3.80853 SRR1342218 embryo marco morpholino 3.7924800000000003 SRR630464 5 dpf injected epidermidis 3.7737 SRR1048059 pineal gland light 3.75768 SRR1004788 larvae impdh1b morpholino 3.7445699999999995 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 3.7388 SRR372787 2-4 cell normal 3.67653 SRR372798 28 hpf normal 3.6616400000000002 SRR658537 bud Gata6 morphant 3.64795 SRR1291417 5 dpi injected marinum 3.6038 SRR1004785 larvae normal 3.60129 SRR1205154 5dpf transgenic sqET20 3.5222599999999997 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 3.47031 SRR1004787 larvae impdh1a morpholino 3.4361699999999997 SRR1167753 embryo bacterial infection 3.43226 SRR1188156 embryo Control PBS 4 hpi 3.38021 SRR1342217 embryo infection with Mycobacterium marinum 3.36226 SRR776507 embryo normal 3.3504699999999996 SRR516127 skin male and 5 month 3.3308400000000002 SRR630463 5 dpf normal 3.31604 SRR1534351 larvae 500 ug/l BDE47 treatment 3.28537 SRR592699 pineal gland normal 3.24606 SRR527840 24hpf normal 3.18099 SRR592698 pineal gland normal 3.18079 SRR658541 6 somite normal 3.17873 SRR658543 6 somite Gata5 morphan 3.17576 SRR592700 pineal gland normal 3.0925599999999998 SRR891504 liver normal 3.0924400000000003 SRR797917 embryo pbx2/4-MO and prdm1-/- 3.07915 SRR776508 embryo miR-146 knockdown 3.0716099999999997 SRR1167752 embryo normal 3.05647 SRR1035981 13 hpf rx3+/+ or rx3+/- 3.04683 SRR658547 6 somite Gata5/6 morphant 3.0394099999999997 SRR516121 skin male and 3.5 year 3.0253400000000004 SRR1647681 head kidney SVCV treatment 3.00159 SRR610741 3 dpf express Ras 2.91568 SRR942769 embryo myd88+/+ 2.88397 SRR1167757 embryo mpeg1 morpholino and bacterial infection 2.87312 SRR527836 24hpf normal 2.8463 SRR748490 1 kcell normal 2.83397 SRR941749 anterior pectoral fin normal 2.8269599999999997 SRR1534350 larvae 5 ug/l BDE47 treatment 2.8183700000000003 SRR592701 pineal gland normal 2.7616400000000003 SRR1534349 larvae DMSO vehicle 2.72364 SRR516124 skin male and 3.5 year 2.7066 SRR592703 pineal gland normal 2.70293 SRR516126 skin male and 5 month 2.6802799999999998 SRR942764 embryo myd88-/- 2.6735900000000004 SRR797914 embryo pbx2/4-MO 2.66882 SRR594771 endothelium normal 2.60886 SRR594769 blood normal 2.59481 SRR749515 24 hpf eif3ha morphant 2.5615900000000003 SRR592702 pineal gland normal 2.5293900000000002 SRR1104058 heart normal 2.50877 SRR1028003 head normal 2.46326 SRR1647683 spleen SVCV treatment 2.4588099999999997 SRR1648854 brain normal 2.4065 SRR941753 posterior pectoral fin normal 2.37256 SRR527844 24hpf normal 2.3627599999999997 SRR1647679 head kidney normal 2.3505599999999998 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 2.33244 SRR1708345 embryo SIBAS 2.3181599999999998 SRR535978 larvae normal 2.28134 SRR776510 embryo Salmonella infected and miR-146 knockdown 2.27766 SRR1005529 embryo control morpholino 2.2569 SRR801554 embryo control morpholino 2.2535 SRR535986 larvae nhsl1b mut 2.20763 SRR891512 blood normal 2.19192 SRR776509 embryo Salmonella infected 2.1874599999999997 SRR1104059 heart kctd10 mut 2.15981 SRR516132 skin male and 5 month 2.1571 SRR1647680 head kidney SVCV treatment 2.14361 SRR1167756 embryo mpeg1 morpholino 2.1027299999999998 SRR1708343 embryo MUTAS 2.09104 SRR527835 tail normal 2.06711 SRR700537 heart Gata4 morpholino 2.05867 SRR1035984 13 hpf normal 2.04089 SRR1647684 spleen SVCV treatment 2.0261099999999996 SRR372800 2 dpf normal 2.02257 SRR957181 heart normal 1.9658400000000003 SRR1035978 13 hpf rx3-/- 1.96419 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 1.9599900000000001 SRR372789 1K cell normal 1.94307 SRR1562528 eye normal 1.92515 SRR1342216 embryo norml 1.8588099999999999 ERR023144 brain normal 1.8458599999999998 SRR372802 5 dpf normal 1.83063 SRR1005530 embryo RPL11 morpholino 1.8150400000000002 SRR065197 3 dpf U1C knockout 1.78655 SRR535890 larvae normal 1.77814 SRR801555 embryo RPS19 morpholino 1.75455 SRR1708346 embryo SIBPS 1.7423 SRR535848 larvae hoxb1b mut 1.74131 SRR957180 heart 7 days after heart tip amputation 1.7258 SRR535849 larvae normal 1.72023 ERR594417 retina normal 1.71715 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 1.70075 SRR748488 sperm normal 1.6771099999999999 SRR519722 4 dpf FETOH treatment 1.6769900000000002 ERR594416 retina transgenic flk1 1.6530799999999999 SRR535926 larvae normal 1.64927 SRR519752 7 dpf VD3 treatment 1.63008 SRR519742 4 dpf VD3 treatment 1.62704 SRR1648856 brain normal 1.61289 SRR535850 larvae hoxb1b mut 1.60408 SRR535943 larvae vangl mut 1.59135 SRR1648855 brain normal 1.57997 SRR535913 larvae krox mut 1.54515 SRR633516 larvae normal 1.5217 SRR535847 larvae normal 1.50937 SRR527833 5 dpf normal 1.4703899999999999 SRR700534 heart control morpholino 1.46183 SRR535852 larvae hoxb1b mut 1.43923 SRR633550 larvae exposed to hypoxia stress 1.4277799999999998 SRR891495 heart normal 1.38628 SRR519732 7 dpf FETOH treatment 1.3714600000000001 SRR1565811 brain normal 1.3703299999999998 SRR519747 6 dpf VD3 treatment 1.36579 SRR1565809 brain normal 1.3242200000000002 SRR519727 6 dpf FETOH treatment 1.30952 SRR535851 larvae normal 1.3069 SRR1647682 spleen normal 1.29159 SRR1028002 head normal 1.2889700000000002 SRR801556 embryo RPS19 and p53 morpholino 1.2637 SRR1708344 embryo MUTPS 1.25501 SRR1562532 spleen normal 1.2465700000000002 SRR519717 2 dpf FETOH treatment 1.2359799999999999 SRR514030 retina id2a morpholino 1.23346 SRR1565813 brain normal 1.22718 SRR1021215 sphere stage Mzeomesa 1.20791 SRR516135 skin male and 5 month 1.1711799999999999 SRR1021213 sphere stage normal 1.16747 SRR633544 larvae exposed to cold stress 1.12971 SRR726540 5 dpf normal 1.09165 SRR065196 3 dpf normal 1.07336 SRR1028004 head normal 1.06633 SRR514028 retina control morpholino 1.0603200000000002 SRR038624 embryo traf6 morpholino and bacterial infection 1.04877 SRR372791 dome normal 1.03714 SRR519737 2 dpf VD3 treatment 1.02401 SRR800046 sphere stage 5azaCyD treatment 1.00631 SRR1565807 brain normal 0.996001 SRR527834 head normal 0.9744200000000001 SRR516122 skin male and 3.5 year 0.9728209999999999 SRR038626 embryo control morpholino and bacterial infection 0.9694139999999999 SRR1562531 muscle normal 0.96915 SRR038625 embryo traf6 morpholino 0.9534309999999999 SRR1565815 brain normal 0.903301 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 0.8612479999999999 SRR1565819 brain normal 0.826342 SRR831692 embryo normal 0.8168850000000001 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.791668 SRR1035237 liver transgenic UHRF1 0.772142 SRR726542 5 dpf infection with control 0.770528 SRR038627 embryo control morpholino 0.746169 SRR886457 512 cell 4-thio-UTP metabolic labeling 0.705203 SRR527832 16-36 hpf normal 0.704681 SRR1035239 liver transgenic mCherry control 0.654084 SRR800043 sphere stage normal 0.6164229999999999 SRR1565805 brain normal 0.615135 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.598809 SRR891510 muscle normal 0.478026 SRR1565817 brain normal 0.45109099999999996 SRR726541 5 dpf infection with Mycobacterium marinum 0.40316 SRR1621206 embryo normal 0.361975 SRR1569491 embryo normal 0.361534 SRR800045 muscle normal 0.34874299999999997 SRR800049 sphere stage control treatment 0.343119 SRR800037 egg normal 0.33475 SRR891511 brain normal 0.245233 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.24132399999999998 ERR594418 retina transgenic flk1 and develop tumors 0.179575 SRR1049814 256 cell normal 0.164444 SRR886456 256 cell 4-thio-UTP metabolic labeling 0.131727 SRR1569495 embryo normal 0.065502 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.0172273