sample tissue condition fpkm SRR1035239 liver transgenic mCherry control 18.0551 SRR1562530 liver normal 8.60473 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 8.20674 SRR1205160 5dpf transgenic sqET20 and GFP+ 8.20323 SRR1299129 caudal fin Seven days time after treatment 7.3845600000000005 SRR941753 posterior pectoral fin normal 7.02188 SRR941749 anterior pectoral fin normal 6.14123 SRR594769 blood normal 6.06885 SRR1647682 spleen normal 5.62906 SRR891504 liver normal 5.1547 SRR1647683 spleen SVCV treatment 5.11191 SRR065197 3 dpf U1C knockout 4.64637 SRR1562531 muscle normal 4.4779599999999995 SRR1708343 embryo MUTAS 4.40195 SRR514028 retina control morpholino 4.29329 SRR1039573 gastrointestinal diet 0.75 NPM 4.236219999999999 SRR065196 3 dpf normal 3.9033 SRR1291414 5 dpi normal 3.89245 SRR1299127 caudal fin Two days time after treatment 3.86591 SRR1299128 caudal fin Three days time after treatment 3.84352 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 3.83189 SRR514030 retina id2a morpholino 3.71253 SRR1035237 liver transgenic UHRF1 3.68561 SRR1562532 spleen normal 3.65136 SRR038627 embryo control morpholino 3.48995 SRR1291417 5 dpi injected marinum 3.45601 SRR630463 5 dpf normal 3.4073900000000004 SRR1188148 embryo Control PBS 0.5 hpi 3.3700900000000003 SRR630464 5 dpf injected epidermidis 3.3169699999999995 SRR1299124 caudal fin Zero day time after treatment 3.2874199999999996 SRR1039571 gastrointestinal diet 0.1 NPM 3.19159 SRR038626 embryo control morpholino and bacterial infection 2.98889 SRR726542 5 dpf infection with control 2.97235 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 2.96667 SRR1299125 caudal fin Half day time after treatment 2.90095 SRR891510 muscle normal 2.86227 SRR1205154 5dpf transgenic sqET20 2.85412 SRR1188156 embryo Control PBS 4 hpi 2.85237 SRR1523211 embryo control morpholino 2.83544 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 2.82225 SRR726541 5 dpf infection with Mycobacterium marinum 2.79792 SRR1188152 embryo Insulin 0.5 hpi 2.78943 SRR1167756 embryo mpeg1 morpholino 2.75457 SRR519732 7 dpf FETOH treatment 2.71543 SRR942764 embryo myd88-/- 2.65828 SRR1648856 brain normal 2.6496299999999997 SRR1167762 embryo ptpn6 morpholino 2.6059099999999997 SRR1004788 larvae impdh1b morpholino 2.5953 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 2.5737 SRR801556 embryo RPS19 and p53 morpholino 2.54904 ERR023146 head kidney normal 2.54732 ERR023143 swim bladder normal 2.5430900000000003 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 2.54156 SRR610742 3 dpf express NICD 2.54086 SRR1188160 embryo Insulin 4 hpi 2.51845 SRR1004785 larvae normal 2.5068799999999998 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 2.4958099999999996 SRR535978 larvae normal 2.48192 SRR519727 6 dpf FETOH treatment 2.4107 SRR1167753 embryo bacterial infection 2.37048 SRR519752 7 dpf VD3 treatment 2.36445 SRR1708344 embryo MUTPS 2.33386 SRR1299126 caudal fin One day time after treatment 2.30196 SRR1167752 embryo normal 2.29869 SRR1647684 spleen SVCV treatment 2.28974 SRR038625 embryo traf6 morpholino 2.28848 SRR527834 head normal 2.25853 SRR633544 larvae exposed to cold stress 2.19747 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 2.1905900000000003 SRR610741 3 dpf express Ras 2.1890099999999997 SRR519717 2 dpf FETOH treatment 2.18152 SRR516131 skin male and 5 month 2.1733 SRR1004786 larvae control morpholino 2.16767 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 2.1613 SRR1647680 head kidney SVCV treatment 2.14712 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 2.14129 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 2.10434 SRR519737 2 dpf VD3 treatment 2.10417 SRR594771 endothelium normal 2.10334 SRR516123 skin male and 3.5 year 2.07505 SRR1523214 embryo glut12 morpholino 2.03767 SRR535852 larvae hoxb1b mut 2.01784 SRR1167763 embryo ptpn6 morpholino and bacterial infection 2.0067 SRR519747 6 dpf VD3 treatment 1.9969999999999999 SRR726540 5 dpf normal 1.9666700000000001 SRR038624 embryo traf6 morpholino and bacterial infection 1.95618 SRR372798 28 hpf normal 1.9415799999999999 SRR942769 embryo myd88+/+ 1.92335 SRR535913 larvae krox mut 1.91347 SRR610740 3 dpf normal 1.8749799999999999 SRR1708346 embryo SIBPS 1.84677 SRR372800 2 dpf normal 1.79785 SRR1005530 embryo RPL11 morpholino 1.79371 SRR535849 larvae normal 1.7734900000000002 SRR1342216 embryo norml 1.74384 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 1.73855 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 1.7376200000000002 SRR519722 4 dpf FETOH treatment 1.7209999999999999 SRR535943 larvae vangl mut 1.7119099999999998 SRR1562528 eye normal 1.70547 SRR516127 skin male and 5 month 1.6970599999999998 SRR800045 muscle normal 1.6115 SRR516125 skin male and 3.5 year 1.6047 SRR776509 embryo Salmonella infected 1.56461 SRR519742 4 dpf VD3 treatment 1.5620100000000001 SRR1004789 larvae impdh2 morpholino 1.5545799999999999 SRR700534 heart control morpholino 1.55287 SRR535926 larvae normal 1.54062 SRR1708345 embryo SIBAS 1.5251299999999999 SRR516126 skin male and 5 month 1.5065 SRR535851 larvae normal 1.5025 SRR535850 larvae hoxb1b mut 1.47689 SRR776507 embryo normal 1.43541 SRR749514 24 hpf normal 1.4056600000000001 SRR592698 pineal gland normal 1.39316 SRR831692 embryo normal 1.3821700000000001 SRR749515 24 hpf eif3ha morphant 1.35588 SRR1004787 larvae impdh1a morpholino 1.3517700000000001 SRR1647679 head kidney normal 1.3190600000000001 SRR801555 embryo RPS19 morpholino 1.2790000000000001 SRR535847 larvae normal 1.26462 SRR633516 larvae normal 1.26268 SRR633550 larvae exposed to hypoxia stress 1.24868 SRR1562529 intestine and pancreas normal 1.2430700000000001 SRR776508 embryo miR-146 knockdown 1.23668 SRR372802 5 dpf normal 1.23149 SRR700537 heart Gata4 morpholino 1.21595 SRR516128 skin male and 5 month 1.18875 SRR1534349 larvae DMSO vehicle 1.18696 SRR1028003 head normal 1.17716 SRR1648854 brain normal 1.15996 SRR1647681 head kidney SVCV treatment 1.13394 SRR1534350 larvae 5 ug/l BDE47 treatment 1.12966 SRR516132 skin male and 5 month 1.09313 SRR1005529 embryo control morpholino 1.09121 SRR801554 embryo control morpholino 1.08956 SRR1167757 embryo mpeg1 morpholino and bacterial infection 1.08057 SRR516130 skin male and 5 month 1.07609 SRR535890 larvae normal 1.048 SRR658543 6 somite Gata5 morphan 1.03463 SRR1569491 embryo normal 1.01967 SRR527836 24hpf normal 1.0195100000000001 SRR516133 skin male and 5 month 0.991957 SRR535848 larvae hoxb1b mut 0.989849 SRR797914 embryo pbx2/4-MO 0.9820129999999999 SRR1342218 embryo marco morpholino 0.9664510000000001 SRR535986 larvae nhsl1b mut 0.95614 SRR527835 tail normal 0.912481 SRR1562533 testis normal 0.87074 SRR1104058 heart normal 0.844147 SRR516124 skin male and 3.5 year 0.8411709999999999 SRR1342217 embryo infection with Mycobacterium marinum 0.837974 SRR527832 16-36 hpf normal 0.817617 SRR516129 skin male and 5 month 0.811167 SRR516122 skin male and 3.5 year 0.805595 ERR023144 brain normal 0.7746770000000001 SRR527833 5 dpf normal 0.7695930000000001 SRR516121 skin male and 3.5 year 0.725759 SRR1028004 head normal 0.677226 SRR1104059 heart kctd10 mut 0.665324 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 0.648405 SRR797908 embryo normal 0.612332 ERR594416 retina transgenic flk1 0.604115 SRR797917 embryo pbx2/4-MO and prdm1-/- 0.594635 SRR1028002 head normal 0.594134 SRR797911 embryo prdm1-/- 0.593701 SRR1569495 embryo normal 0.5412859999999999 SRR658545 6 somite Gata6 morphant 0.517158 SRR658539 bud Gata5/6 morphant 0.515437 SRR776510 embryo Salmonella infected and miR-146 knockdown 0.503869 SRR1534351 larvae 500 ug/l BDE47 treatment 0.503425 SRR658547 6 somite Gata5/6 morphant 0.485275 SRR527840 24hpf normal 0.457143 SRR1648855 brain normal 0.436424 SRR1035978 13 hpf rx3-/- 0.43050600000000006 SRR516135 skin male and 5 month 0.411617 SRR891512 blood normal 0.407052 SRR527844 24hpf normal 0.379634 SRR891495 heart normal 0.351436 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.321141 SRR748488 sperm normal 0.30880599999999997 SRR658535 bud Gata5 morphant 0.305102 ERR594417 retina normal 0.300358 SRR592703 pineal gland normal 0.293865 SRR658541 6 somite normal 0.279561 SRR592699 pineal gland normal 0.266574 ERR594418 retina transgenic flk1 and develop tumors 0.26473 SRR1565811 brain normal 0.222687 SRR800046 sphere stage 5azaCyD treatment 0.215533 SRR1565809 brain normal 0.202211 SRR592700 pineal gland normal 0.201268 SRR1565815 brain normal 0.19985 SRR957181 heart normal 0.199276 SRR658537 bud Gata6 morphant 0.19595 SRR516134 skin male and 5 month 0.18613 SRR1035981 13 hpf rx3+/+ or rx3+/- 0.18106 SRR1565819 brain normal 0.164296 SRR1565813 brain normal 0.150776 SRR1035984 13 hpf normal 0.145897 SRR1565817 brain normal 0.134665 SRR658533 bud normal 0.125303 SRR1565807 brain normal 0.12091099999999999 SRR891511 brain normal 0.101194 SRR592702 pineal gland normal 0.0975229 SRR1565805 brain normal 0.0881077 ERR023145 heart normal 0.0651486 SRR957180 heart 7 days after heart tip amputation 0.05823969999999999 SRR372793 shield normal 0.0571308 SRR372796 bud normal 0.0535261