sample tissue condition fpkm SRR800037 egg normal 65.3262 SRR800043 sphere stage normal 39.181 SRR800046 sphere stage 5azaCyD treatment 32.0698 SRR800049 sphere stage control treatment 30.3141 SRR1621206 embryo normal 21.2761 SRR1049814 256 cell normal 19.1302 SRR372787 2-4 cell normal 16.7288 SRR527835 tail normal 16.0997 SRR1004789 larvae impdh2 morpholino 14.4936 SRR1035239 liver transgenic mCherry control 14.3179 SRR1004787 larvae impdh1a morpholino 12.5683 SRR658535 bud Gata5 morphant 12.2364 SRR1035978 13 hpf rx3-/- 11.8802 SRR516132 skin male and 5 month 11.8744 SRR748489 egg normal 11.794 SRR800045 muscle normal 11.6557 SRR1035981 13 hpf rx3+/+ or rx3+/- 11.2925 SRR1035984 13 hpf normal 11.1549 SRR658537 bud Gata6 morphant 10.9625 SRR1035237 liver transgenic UHRF1 10.8006 SRR658539 bud Gata5/6 morphant 10.4317 SRR658533 bud normal 10.1544 SRR748490 1 kcell normal 9.68787 SRR1021213 sphere stage normal 8.03148 SRR372791 dome normal 7.78114 SRR1021215 sphere stage Mzeomesa 7.535089999999999 SRR1048059 pineal gland light 7.41527 SRR038625 embryo traf6 morpholino 7.233689999999999 SRR372793 shield normal 6.78845 SRR1039571 gastrointestinal diet 0.1 NPM 6.31696 SRR516135 skin male and 5 month 6.2956199999999995 SRR658543 6 somite Gata5 morphan 6.2947 SRR1647682 spleen normal 5.66247 SRR633544 larvae exposed to cold stress 5.63779 SRR658545 6 somite Gata6 morphant 5.6336699999999995 SRR527833 5 dpf normal 5.38718 SRR797911 embryo prdm1-/- 5.2255199999999995 SRR372789 1K cell normal 5.14913 SRR658541 6 somite normal 5.1208 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 5.11984 SRR941753 posterior pectoral fin normal 5.04714 SRR658547 6 somite Gata5/6 morphant 4.93701 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 4.93401 SRR1647681 head kidney SVCV treatment 4.77422 SRR797914 embryo pbx2/4-MO 4.69839 SRR797908 embryo normal 4.63532 SRR372796 bud normal 4.63249 SRR038624 embryo traf6 morpholino and bacterial infection 4.5506 SRR726541 5 dpf infection with Mycobacterium marinum 4.54055 SRR1647680 head kidney SVCV treatment 4.47846 SRR1647684 spleen SVCV treatment 4.45006 SRR749515 24 hpf eif3ha morphant 4.40549 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 4.27426 SRR1569491 embryo normal 4.23113 SRR527834 head normal 4.04028 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 3.9963699999999998 SRR749514 24 hpf normal 3.96789 SRR1569495 embryo normal 3.7840800000000003 SRR797917 embryo pbx2/4-MO and prdm1-/- 3.7718800000000003 SRR886457 512 cell 4-thio-UTP metabolic labeling 3.6989 SRR038627 embryo control morpholino 3.6825099999999997 SRR1647679 head kidney normal 3.67274 SRR700537 heart Gata4 morpholino 3.63865 SRR1648855 brain normal 3.5975300000000003 SRR1291417 5 dpi injected marinum 3.52929 SRR516130 skin male and 5 month 3.3668699999999996 SRR1104059 heart kctd10 mut 3.29659 SRR891510 muscle normal 3.23223 SRR594769 blood normal 3.22182 SRR516134 skin male and 5 month 3.21253 SRR748488 sperm normal 3.18276 SRR748491 germ ring normal 3.1248099999999996 SRR594771 endothelium normal 3.10046 SRR065197 3 dpf U1C knockout 3.07649 ERR594417 retina normal 3.05417 SRR726540 5 dpf normal 3.01399 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 2.95149 SRR1039573 gastrointestinal diet 0.75 NPM 2.87323 SRR527836 24hpf normal 2.86111 SRR957181 heart normal 2.86111 SRR891512 blood normal 2.7825 SRR1167762 embryo ptpn6 morpholino 2.7582400000000002 SRR1188156 embryo Control PBS 4 hpi 2.72712 SRR941749 anterior pectoral fin normal 2.697 SRR065196 3 dpf normal 2.6851700000000003 SRR1188160 embryo Insulin 4 hpi 2.54775 SRR957180 heart 7 days after heart tip amputation 2.5190599999999996 SRR1188148 embryo Control PBS 0.5 hpi 2.5124400000000002 SRR535851 larvae normal 2.48322 SRR516123 skin male and 3.5 year 2.47513 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 2.44021 SRR038626 embryo control morpholino and bacterial infection 2.4335400000000003 SRR514028 retina control morpholino 2.41729 SRR891511 brain normal 2.38173 SRR527832 16-36 hpf normal 2.37475 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 2.32464 ERR594416 retina transgenic flk1 2.2640599999999997 SRR726542 5 dpf infection with control 2.2424 SRR527840 24hpf normal 2.21333 SRR535978 larvae normal 2.2063 SRR1648856 brain normal 2.20385 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 2.18093 SRR1562529 intestine and pancreas normal 2.17177 ERR594418 retina transgenic flk1 and develop tumors 2.16614 SRR1104058 heart normal 2.16127 SRR610742 3 dpf express NICD 2.16019 SRR1188152 embryo Insulin 0.5 hpi 2.1573599999999997 SRR1205160 5dpf transgenic sqET20 and GFP+ 2.1440099999999997 SRR886455 128 cell 4-thio-UTP metabolic labeling 2.1390000000000002 SRR372802 5 dpf normal 2.0893599999999997 SRR886456 256 cell 4-thio-UTP metabolic labeling 2.06792 SRR891504 liver normal 2.02885 SRR1523214 embryo glut12 morpholino 2.01168 SRR514030 retina id2a morpholino 1.9967599999999999 SRR1648854 brain normal 1.9700099999999998 SRR592700 pineal gland normal 1.8980599999999999 SRR592702 pineal gland normal 1.88475 SRR535926 larvae normal 1.8602299999999998 SRR831692 embryo normal 1.82657 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 1.8174599999999999 SRR372800 2 dpf normal 1.79063 SRR610740 3 dpf normal 1.74396 SRR776510 embryo Salmonella infected and miR-146 knockdown 1.7185700000000002 SRR1004785 larvae normal 1.71805 SRR592701 pineal gland normal 1.65651 SRR372798 28 hpf normal 1.64674 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 1.64073 SRR535848 larvae hoxb1b mut 1.63989 SRR516125 skin male and 3.5 year 1.631 SRR592698 pineal gland normal 1.62489 SRR1562533 testis normal 1.59225 SRR700534 heart control morpholino 1.54778 SRR1534349 larvae DMSO vehicle 1.50627 SRR1565807 brain normal 1.49745 SRR1562528 eye normal 1.49125 SRR519737 2 dpf VD3 treatment 1.4666 SRR1299129 caudal fin Seven days time after treatment 1.44702 SRR592699 pineal gland normal 1.4186299999999998 SRR1562530 liver normal 1.37996 SRR516128 skin male and 5 month 1.36406 SRR1299125 caudal fin Half day time after treatment 1.3368799999999998 SRR516129 skin male and 5 month 1.33185 SRR527844 24hpf normal 1.2961799999999999 SRR630464 5 dpf injected epidermidis 1.2899399999999999 SRR1005530 embryo RPL11 morpholino 1.2858100000000001 SRR519752 7 dpf VD3 treatment 1.27274 SRR1565809 brain normal 1.2228 SRR519717 2 dpf FETOH treatment 1.21374 SRR519722 4 dpf FETOH treatment 1.21238 SRR1565805 brain normal 1.19955 SRR1565815 brain normal 1.1824299999999999 SRR519747 6 dpf VD3 treatment 1.17117 SRR1647683 spleen SVCV treatment 1.168 SRR535850 larvae hoxb1b mut 1.16346 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 1.16157 SRR516131 skin male and 5 month 1.15668 SRR519742 4 dpf VD3 treatment 1.14772 SRR1708346 embryo SIBPS 1.14398 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 1.11953 SRR1565817 brain normal 1.11375 SRR1299128 caudal fin Three days time after treatment 1.08303 SRR1167756 embryo mpeg1 morpholino 1.07918 ERR023144 brain normal 1.07866 SRR633550 larvae exposed to hypoxia stress 1.07606 SRR535986 larvae nhsl1b mut 1.0427799999999998 SRR516126 skin male and 5 month 1.02821 SRR519732 7 dpf FETOH treatment 1.0272299999999999 SRR1291414 5 dpi normal 1.00784 SRR1167752 embryo normal 1.00455 SRR1342218 embryo marco morpholino 0.995135 SRR1534350 larvae 5 ug/l BDE47 treatment 0.9845659999999999 SRR1562532 spleen normal 0.982426 SRR1004786 larvae control morpholino 0.9588620000000001 SRR519727 6 dpf FETOH treatment 0.947945 SRR1004788 larvae impdh1b morpholino 0.9446370000000001 SRR1205154 5dpf transgenic sqET20 0.9394790000000001 SRR1299127 caudal fin Two days time after treatment 0.9332309999999999 SRR1708344 embryo MUTPS 0.9235040000000001 SRR516124 skin male and 3.5 year 0.8977930000000001 SRR1167763 embryo ptpn6 morpholino and bacterial infection 0.8888 SRR1565819 brain normal 0.873347 SRR1167757 embryo mpeg1 morpholino and bacterial infection 0.865942 SRR1565811 brain normal 0.855498 SRR630463 5 dpf normal 0.8456610000000001 SRR1028004 head normal 0.8398549999999999 SRR1708345 embryo SIBAS 0.806995 SRR1299124 caudal fin Zero day time after treatment 0.783833 SRR592703 pineal gland normal 0.768493 SRR1708343 embryo MUTAS 0.7665270000000001 SRR535847 larvae normal 0.743818 SRR633516 larvae normal 0.740387 SRR1048061 pineal gland dark 0.734054 SRR1562531 muscle normal 0.7322770000000001 SRR1299126 caudal fin One day time after treatment 0.728139 SRR776508 embryo miR-146 knockdown 0.718528 SRR610741 3 dpf express Ras 0.715478 SRR535943 larvae vangl mut 0.687809 SRR1028003 head normal 0.686046 SRR801555 embryo RPS19 morpholino 0.6036729999999999 SRR1028002 head normal 0.601867 SRR1342216 embryo norml 0.564369 SRR535849 larvae normal 0.5479149999999999 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 0.48084799999999994 SRR942764 embryo myd88-/- 0.46320100000000003 SRR1534351 larvae 500 ug/l BDE47 treatment 0.46170500000000003 SRR942769 embryo myd88+/+ 0.45382799999999995 SRR535890 larvae normal 0.43228500000000003 SRR516127 skin male and 5 month 0.426763 SRR1167753 embryo bacterial infection 0.42197399999999996 SRR1565813 brain normal 0.341841 ERR023143 swim bladder normal 0.318693 SRR801556 embryo RPS19 and p53 morpholino 0.300122 SRR1005529 embryo control morpholino 0.26237699999999997 SRR801554 embryo control morpholino 0.26198299999999997 ERR023145 heart normal 0.22599899999999998 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.13065 ERR023146 head kidney normal 0.116004 SRR1523211 embryo control morpholino 0.000821898