sample tissue condition fpkm SRR1004785 larvae normal 19019.9 SRR1004787 larvae impdh1a morpholino 15117.0 SRR1562530 liver normal 12139.1 SRR1004786 larvae control morpholino 12012.9 SRR1035239 liver transgenic mCherry control 11999.7 SRR1569491 embryo normal 10947.2 SRR1004788 larvae impdh1b morpholino 10162.7 SRR372802 5 dpf normal 9163.3 SRR1039573 gastrointestinal diet 0.75 NPM 9008.9 SRR801555 embryo RPS19 morpholino 8138.57 SRR527844 24hpf normal 8059.04 SRR1005530 embryo RPL11 morpholino 8044.1 SRR891512 blood normal 7790.26 SRR891504 liver normal 7703.46 SRR1534349 larvae DMSO vehicle 7522.03 SRR801556 embryo RPS19 and p53 morpholino 7463.16 SRR1534350 larvae 5 ug/l BDE47 treatment 7253.58 SRR1035237 liver transgenic UHRF1 7100.35 SRR1299126 caudal fin One day time after treatment 6935.05 SRR941753 posterior pectoral fin normal 6866.27 SRR1534351 larvae 500 ug/l BDE47 treatment 6854.97 SRR1039571 gastrointestinal diet 0.1 NPM 6577.07 SRR1299125 caudal fin Half day time after treatment 6502.22 SRR1299127 caudal fin Two days time after treatment 6296.79 SRR1299124 caudal fin Zero day time after treatment 6293.94 SRR941749 anterior pectoral fin normal 6206.5 SRR1004789 larvae impdh2 morpholino 6138.01 SRR594769 blood normal 5984.85 SRR527836 24hpf normal 5944.24 SRR1299129 caudal fin Seven days time after treatment 5873.41 SRR519717 2 dpf FETOH treatment 5782.32 SRR1569495 embryo normal 5682.9 SRR519737 2 dpf VD3 treatment 5527.34 SRR700534 heart control morpholino 5497.91 SRR1562529 intestine and pancreas normal 5490.63 SRR372798 28 hpf normal 5426.95 SRR535978 larvae normal 5369.64 SRR1299128 caudal fin Three days time after treatment 5319.61 SRR1708344 embryo MUTPS 5301.91 SRR1708346 embryo SIBPS 5295.37 SRR519732 7 dpf FETOH treatment 5204.78 SRR1005529 embryo control morpholino 5201.01 SRR801554 embryo control morpholino 5193.2 SRR1647680 head kidney SVCV treatment 5129.42 SRR519752 7 dpf VD3 treatment 5064.61 SRR1205160 5dpf transgenic sqET20 and GFP+ 4940.83 SRR519727 6 dpf FETOH treatment 4932.95 SRR372800 2 dpf normal 4892.13 SRR1205154 5dpf transgenic sqET20 4840.48 SRR1648856 brain normal 4703.76 SRR776507 embryo normal 4659.72 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 4639.28 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 4608.81 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 4589.08 SRR1291414 5 dpi normal 4582.38 SRR1028002 head normal 4577.88 SRR1291417 5 dpi injected marinum 4488.78 SRR527840 24hpf normal 4442.32 SRR630463 5 dpf normal 4418.81 SRR630464 5 dpf injected epidermidis 4383.7 SRR1647679 head kidney normal 4352.91 SRR700537 heart Gata4 morpholino 4344.58 SRR1647681 head kidney SVCV treatment 4327.17 SRR519747 6 dpf VD3 treatment 4314.67 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 4286.73 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 4213.23 SRR594771 endothelium normal 4171.15 SRR519742 4 dpf VD3 treatment 4137.73 SRR1647683 spleen SVCV treatment 4129.17 SRR1028003 head normal 4117.16 SRR1167753 embryo bacterial infection 4091.71 SRR1167752 embryo normal 4014.81 SRR1035981 13 hpf rx3+/+ or rx3+/- 3972.07 SRR1035978 13 hpf rx3-/- 3912.6 SRR1035984 13 hpf normal 3900.97 SRR749515 24 hpf eif3ha morphant 3889.85 SRR1562532 spleen normal 3861.73 SRR1708345 embryo SIBAS 3842.32 SRR748488 sperm normal 3791.83 SRR038625 embryo traf6 morpholino 3774.67 SRR535986 larvae nhsl1b mut 3774.2 SRR519722 4 dpf FETOH treatment 3771.03 SRR749514 24 hpf normal 3757.37 SRR038626 embryo control morpholino and bacterial infection 3733.59 SRR776509 embryo Salmonella infected 3719.37 SRR535943 larvae vangl mut 3718.1 SRR038624 embryo traf6 morpholino and bacterial infection 3705.78 SRR1167757 embryo mpeg1 morpholino and bacterial infection 3693.0 SRR1342218 embryo marco morpholino 3681.54 SRR1188160 embryo Insulin 4 hpi 3680.52 SRR1708343 embryo MUTAS 3655.72 SRR776508 embryo miR-146 knockdown 3635.72 SRR535926 larvae normal 3632.56 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 3624.56 SRR1342216 embryo norml 3604.98 ERR594418 retina transgenic flk1 and develop tumors 3580.63 SRR038627 embryo control morpholino 3573.69 SRR1167756 embryo mpeg1 morpholino 3516.19 SRR1647682 spleen normal 3502.56 SRR1188152 embryo Insulin 0.5 hpi 3482.09 SRR1342217 embryo infection with Mycobacterium marinum 3450.93 SRR1647684 spleen SVCV treatment 3428.52 SRR658541 6 somite normal 3426.1 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 3402.56 SRR1188148 embryo Control PBS 0.5 hpi 3372.86 SRR065197 3 dpf U1C knockout 3333.19 SRR535913 larvae krox mut 3290.92 SRR527832 16-36 hpf normal 3290.17 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 3289.78 SRR776510 embryo Salmonella infected and miR-146 knockdown 3286.76 SRR658547 6 somite Gata5/6 morphant 3261.18 SRR942769 embryo myd88+/+ 3256.42 SRR797908 embryo normal 3244.8 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 3244.58 SRR535890 larvae normal 3209.7 SRR658533 bud normal 3188.51 SRR658537 bud Gata6 morphant 3187.97 SRR658539 bud Gata5/6 morphant 3173.85 SRR633550 larvae exposed to hypoxia stress 3170.67 SRR633516 larvae normal 3161.07 SRR797911 embryo prdm1-/- 3159.09 SRR658545 6 somite Gata6 morphant 3119.45 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 3051.14 SRR891510 muscle normal 3018.94 SRR1028004 head normal 3017.58 SRR658535 bud Gata5 morphant 2983.39 SRR1167763 embryo ptpn6 morpholino and bacterial infection 2966.05 SRR1562531 muscle normal 2958.44 SRR1167762 embryo ptpn6 morpholino 2945.86 SRR942764 embryo myd88-/- 2924.42 SRR610741 3 dpf express Ras 2920.7 SRR797914 embryo pbx2/4-MO 2891.25 SRR797917 embryo pbx2/4-MO and prdm1-/- 2890.05 SRR1188156 embryo Control PBS 4 hpi 2876.05 SRR065196 3 dpf normal 2791.97 SRR726542 5 dpf infection with control 2779.16 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 2777.16 SRR610740 3 dpf normal 2756.38 SRR658543 6 somite Gata5 morphan 2753.99 SRR1523211 embryo control morpholino 2687.65 SRR516125 skin male and 3.5 year 2624.11 SRR372796 bud normal 2619.71 SRR633544 larvae exposed to cold stress 2613.25 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 2585.46 SRR891495 heart normal 2577.08 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 2521.12 SRR1648854 brain normal 2375.99 SRR516128 skin male and 5 month 2366.54 SRR1523214 embryo glut12 morpholino 2366.46 SRR372793 shield normal 2338.24 SRR726540 5 dpf normal 2316.97 SRR610742 3 dpf express NICD 2229.06 SRR516123 skin male and 3.5 year 2227.78 SRR516132 skin male and 5 month 2154.22 SRR535849 larvae normal 2137.67 SRR516121 skin male and 3.5 year 2134.75 SRR535847 larvae normal 2121.4 SRR535852 larvae hoxb1b mut 2110.9 SRR726541 5 dpf infection with Mycobacterium marinum 2080.83 SRR831692 embryo normal 2065.08 SRR535850 larvae hoxb1b mut 2062.16 SRR535848 larvae hoxb1b mut 2050.12 SRR516131 skin male and 5 month 2032.77 SRR535851 larvae normal 2010.32 SRR1104058 heart normal 1995.03 SRR516130 skin male and 5 month 1964.8 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 1920.06 SRR516124 skin male and 3.5 year 1918.65 SRR516122 skin male and 3.5 year 1906.71 SRR516127 skin male and 5 month 1883.46 SRR748489 egg normal 1850.85 SRR516129 skin male and 5 month 1817.34 SRR527834 head normal 1748.26 SRR592701 pineal gland normal 1746.39 SRR516134 skin male and 5 month 1725.02 SRR527833 5 dpf normal 1719.53 SRR516126 skin male and 5 month 1712.25 SRR1565813 brain normal 1622.07 SRR516135 skin male and 5 month 1605.37 SRR1048061 pineal gland dark 1490.4 SRR1104059 heart kctd10 mut 1471.02 SRR516133 skin male and 5 month 1464.7 SRR1562528 eye normal 1456.79 SRR592702 pineal gland normal 1409.33 SRR1562533 testis normal 1391.72 ERR594416 retina transgenic flk1 1380.02 SRR1648855 brain normal 1375.34 ERR023145 heart normal 1358.21 SRR592703 pineal gland normal 1310.61 SRR1565815 brain normal 1227.93 SRR592699 pineal gland normal 1213.88 SRR592700 pineal gland normal 1199.46 ERR023146 head kidney normal 1174.8 SRR1565819 brain normal 1169.57 SRR1565807 brain normal 1124.92 SRR1565817 brain normal 1088.49 SRR592698 pineal gland normal 1087.9 SRR1565805 brain normal 1032.44 SRR1048059 pineal gland light 1003.22 SRR1565809 brain normal 938.797 SRR372787 2-4 cell normal 901.71 SRR527835 tail normal 894.372 SRR748491 germ ring normal 869.2130000000001 SRR514028 retina control morpholino 821.24 SRR1565811 brain normal 797.6389999999999 SRR514030 retina id2a morpholino 751.3739999999999 SRR372791 dome normal 709.885 SRR957181 heart normal 690.488 ERR594417 retina normal 641.616 SRR800045 muscle normal 576.746 SRR748490 1 kcell normal 542.678 SRR957180 heart 7 days after heart tip amputation 504.77099999999996 SRR1049814 256 cell normal 469.98699999999997 SRR1621206 embryo normal 420.959 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 408.909 SRR1021213 sphere stage normal 371.194 SRR1021215 sphere stage Mzeomesa 349.798 SRR891511 brain normal 342.444 ERR023143 swim bladder normal 317.38599999999997 SRR372789 1K cell normal 231.78099999999998 ERR023144 brain normal 202.168 SRR800043 sphere stage normal 188.576 SRR800046 sphere stage 5azaCyD treatment 126.376 SRR800049 sphere stage control treatment 58.6224 SRR800037 egg normal 54.68 SRR886455 128 cell 4-thio-UTP metabolic labeling 14.2767 SRR886457 512 cell 4-thio-UTP metabolic labeling 0.00148773 SRR886456 256 cell 4-thio-UTP metabolic labeling 0.00134615