sample tissue condition fpkm SRR941749 anterior pectoral fin normal 75.5401 SRR941753 posterior pectoral fin normal 72.3942 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 56.4162 SRR516122 skin male and 3.5 year 45.4576 ERR023144 brain normal 44.6759 SRR516125 skin male and 3.5 year 42.911 SRR1205160 5dpf transgenic sqET20 and GFP+ 42.8229 SRR516124 skin male and 3.5 year 42.3905 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 38.8532 SRR630464 5 dpf injected epidermidis 38.7037 SRR1299124 caudal fin Zero day time after treatment 37.4115 SRR1647680 head kidney SVCV treatment 37.1808 SRR630463 5 dpf normal 35.4721 SRR516129 skin male and 5 month 34.7271 SRR516126 skin male and 5 month 34.3606 SRR516123 skin male and 3.5 year 33.8445 SRR516133 skin male and 5 month 33.2515 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 32.7388 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 31.0895 SRR1291417 5 dpi injected marinum 31.002 SRR594771 endothelium normal 29.7169 SRR1647679 head kidney normal 29.3519 SRR1004788 larvae impdh1b morpholino 29.3497 SRR516128 skin male and 5 month 28.8875 SRR519732 7 dpf FETOH treatment 26.756 SRR516121 skin male and 3.5 year 26.5841 SRR1205154 5dpf transgenic sqET20 26.5218 SRR776507 embryo normal 26.4807 SRR1291414 5 dpi normal 26.2228 ERR023143 swim bladder normal 26.0595 SRR516134 skin male and 5 month 25.4657 SRR516131 skin male and 5 month 25.2259 SRR1167753 embryo bacterial infection 25.0585 SRR516135 skin male and 5 month 24.3892 SRR1167752 embryo normal 24.1812 SRR516127 skin male and 5 month 24.1451 SRR1342216 embryo norml 23.9938 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 23.9891 ERR594416 retina transgenic flk1 22.7425 SRR1647683 spleen SVCV treatment 22.5709 SRR1188152 embryo Insulin 0.5 hpi 21.7357 SRR1188160 embryo Insulin 4 hpi 21.545 SRR519727 6 dpf FETOH treatment 21.4293 SRR1028002 head normal 21.353 SRR1299129 caudal fin Seven days time after treatment 21.263 SRR1647681 head kidney SVCV treatment 20.7585 SRR594769 blood normal 20.7186 SRR1647682 spleen normal 20.4978 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 20.4448 SRR1299126 caudal fin One day time after treatment 20.4291 SRR1562532 spleen normal 20.1515 SRR372802 5 dpf normal 19.9338 SRR1342217 embryo infection with Mycobacterium marinum 19.9162 SRR1534351 larvae 500 ug/l BDE47 treatment 19.7604 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 19.6344 SRR1648855 brain normal 19.4731 SRR1004786 larvae control morpholino 19.3278 SRR1562533 testis normal 19.2551 SRR1167757 embryo mpeg1 morpholino and bacterial infection 18.9703 SRR1342218 embryo marco morpholino 18.9228 SRR942769 embryo myd88+/+ 18.7255 SRR1534350 larvae 5 ug/l BDE47 treatment 18.6257 SRR1562531 muscle normal 18.236 SRR535890 larvae normal 17.8556 SRR1167756 embryo mpeg1 morpholino 17.7886 SRR519747 6 dpf VD3 treatment 17.5114 ERR023145 heart normal 17.4142 SRR1188148 embryo Control PBS 0.5 hpi 17.1203 SRR527834 head normal 17.0235 SRR1523214 embryo glut12 morpholino 16.9651 SRR519752 7 dpf VD3 treatment 16.8365 SRR535852 larvae hoxb1b mut 16.8166 SRR1188156 embryo Control PBS 4 hpi 16.7793 SRR942764 embryo myd88-/- 16.6353 SRR1562529 intestine and pancreas normal 16.3791 SRR516130 skin male and 5 month 16.3187 SRR1299125 caudal fin Half day time after treatment 16.2303 SRR1647684 spleen SVCV treatment 16.2168 SRR535847 larvae normal 16.1928 SRR957180 heart 7 days after heart tip amputation 15.8885 ERR023146 head kidney normal 15.6642 SRR372798 28 hpf normal 15.3423 SRR592702 pineal gland normal 15.2786 SRR1534349 larvae DMSO vehicle 15.2389 SRR700534 heart control morpholino 15.1942 ERR594418 retina transgenic flk1 and develop tumors 15.036 SRR1648854 brain normal 14.8407 SRR535849 larvae normal 14.7907 SRR1028004 head normal 14.7906 SRR1299127 caudal fin Two days time after treatment 14.6897 SRR776509 embryo Salmonella infected 14.6182 SRR891495 heart normal 14.4832 SRR535850 larvae hoxb1b mut 14.4476 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 14.4446 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 14.3799 SRR592701 pineal gland normal 14.1184 SRR1167763 embryo ptpn6 morpholino and bacterial infection 13.9505 SRR1523211 embryo control morpholino 13.8911 SRR1028003 head normal 13.8638 SRR776508 embryo miR-146 knockdown 13.7239 SRR1299128 caudal fin Three days time after treatment 13.4662 SRR776510 embryo Salmonella infected and miR-146 knockdown 13.4492 SRR700537 heart Gata4 morpholino 13.4397 SRR726542 5 dpf infection with control 13.3059 SRR726540 5 dpf normal 13.2329 SRR1167762 embryo ptpn6 morpholino 13.1862 SRR372800 2 dpf normal 13.004000000000001 SRR592699 pineal gland normal 12.8768 SRR797917 embryo pbx2/4-MO and prdm1-/- 12.7517 SRR1562528 eye normal 12.7079 SRR535913 larvae krox mut 12.575999999999999 SRR797914 embryo pbx2/4-MO 12.5162 SRR831692 embryo normal 12.4359 SRR519722 4 dpf FETOH treatment 12.4269 SRR535848 larvae hoxb1b mut 12.3001 SRR610741 3 dpf express Ras 12.2148 SRR592703 pineal gland normal 12.199000000000002 SRR957181 heart normal 12.1463 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 11.9992 SRR797908 embryo normal 11.9497 SRR891511 brain normal 11.5128 SRR535851 larvae normal 11.3125 SRR797911 embryo prdm1-/- 11.3093 SRR514028 retina control morpholino 11.2979 SRR610742 3 dpf express NICD 11.2387 SRR519737 2 dpf VD3 treatment 10.7989 SRR726541 5 dpf infection with Mycobacterium marinum 10.7447 SRR592700 pineal gland normal 10.6424 SRR633550 larvae exposed to hypoxia stress 10.4954 SRR527833 5 dpf normal 10.2149 SRR1039573 gastrointestinal diet 0.75 NPM 10.1965 SRR610740 3 dpf normal 10.0575 SRR1048059 pineal gland light 9.99368 SRR519742 4 dpf VD3 treatment 9.92872 SRR519717 2 dpf FETOH treatment 9.76337 SRR1004785 larvae normal 9.74383 ERR594417 retina normal 9.630980000000001 SRR1039571 gastrointestinal diet 0.1 NPM 9.566460000000001 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 9.56061 SRR535986 larvae nhsl1b mut 9.122910000000001 SRR535978 larvae normal 8.655339999999999 SRR535943 larvae vangl mut 8.5468 SRR1048061 pineal gland dark 8.54524 SRR1004787 larvae impdh1a morpholino 8.515889999999999 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 8.4186 SRR749514 24 hpf normal 8.38389 SRR065196 3 dpf normal 8.33769 SRR633516 larvae normal 8.21603 SRR1035239 liver transgenic mCherry control 8.10752 SRR1004789 larvae impdh2 morpholino 7.84506 SRR592698 pineal gland normal 7.68768 SRR535926 larvae normal 7.42011 SRR527844 24hpf normal 7.39606 SRR514030 retina id2a morpholino 7.27835 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 7.273439999999999 SRR516132 skin male and 5 month 7.227580000000001 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 7.079689999999999 SRR372796 bud normal 6.91847 SRR527836 24hpf normal 6.82805 SRR749515 24 hpf eif3ha morphant 6.17108 SRR658541 6 somite normal 6.14851 SRR658547 6 somite Gata5/6 morphant 6.14571 SRR038624 embryo traf6 morpholino and bacterial infection 6.08611 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 6.06871 SRR065197 3 dpf U1C knockout 5.97916 SRR038626 embryo control morpholino and bacterial infection 5.903630000000001 SRR891510 muscle normal 5.78504 SRR527840 24hpf normal 5.77716 SRR372793 shield normal 5.77571 SRR1104058 heart normal 5.64026 SRR658543 6 somite Gata5 morphan 5.597659999999999 SRR1569491 embryo normal 5.3012 SRR038625 embryo traf6 morpholino 5.29138 SRR633544 larvae exposed to cold stress 5.04615 SRR658545 6 somite Gata6 morphant 4.92844 SRR800045 muscle normal 4.596480000000001 SRR658533 bud normal 4.51811 SRR038627 embryo control morpholino 4.43645 SRR658535 bud Gata5 morphant 4.430969999999999 SRR1565809 brain normal 4.4237 SRR1565811 brain normal 4.25793 SRR1562530 liver normal 4.11195 SRR1035237 liver transgenic UHRF1 4.0330699999999995 SRR1569495 embryo normal 3.9144699999999997 SRR1708346 embryo SIBPS 3.8105 SRR527832 16-36 hpf normal 3.72484 SRR1708344 embryo MUTPS 3.68076 SRR658539 bud Gata5/6 morphant 3.6011 SRR1565817 brain normal 3.33901 SRR1708345 embryo SIBAS 3.2410900000000002 SRR1565815 brain normal 3.0910599999999997 SRR1708343 embryo MUTAS 3.0397 SRR1104059 heart kctd10 mut 2.9203 SRR1648856 brain normal 2.89483 SRR1565813 brain normal 2.8087299999999997 SRR1565805 brain normal 2.77027 SRR527835 tail normal 2.5186 SRR658537 bud Gata6 morphant 2.09602 SRR1565807 brain normal 2.0404 SRR1565819 brain normal 2.00509 SRR1035981 13 hpf rx3+/+ or rx3+/- 1.88572 SRR1035978 13 hpf rx3-/- 1.8709799999999999 SRR891504 liver normal 1.6825299999999999 SRR891512 blood normal 1.53112 SRR801555 embryo RPS19 morpholino 1.4882 SRR1005530 embryo RPL11 morpholino 1.43299 SRR801556 embryo RPS19 and p53 morpholino 1.41421 SRR886457 512 cell 4-thio-UTP metabolic labeling 1.17303 SRR800046 sphere stage 5azaCyD treatment 0.9329850000000001 SRR372791 dome normal 0.8894219999999999 SRR748491 germ ring normal 0.8567170000000001 SRR1005529 embryo control morpholino 0.688638 SRR801554 embryo control morpholino 0.687604 SRR748488 sperm normal 0.670824 SRR1021215 sphere stage Mzeomesa 0.6388659999999999 SRR800043 sphere stage normal 0.458117 SRR748489 egg normal 0.42928599999999995 SRR1021213 sphere stage normal 0.37244099999999997 SRR800049 sphere stage control treatment 0.26406799999999997 SRR1035984 13 hpf normal 0.143426 SRR1621206 embryo normal 0.0842637 SRR372787 2-4 cell normal 0.054028999999999994