sample tissue condition fpkm SRR1299127 caudal fin Two days time after treatment 360.759 SRR1299124 caudal fin Zero day time after treatment 276.53700000000003 SRR1299126 caudal fin One day time after treatment 269.125 SRR1299128 caudal fin Three days time after treatment 241.94099999999997 SRR1299125 caudal fin Half day time after treatment 226.655 SRR1299129 caudal fin Seven days time after treatment 221.77200000000002 SRR516131 skin male and 5 month 152.22299999999998 SRR516125 skin male and 3.5 year 145.787 SRR516121 skin male and 3.5 year 144.694 SRR516123 skin male and 3.5 year 141.947 ERR023143 swim bladder normal 139.17700000000002 SRR516133 skin male and 5 month 129.27700000000002 SRR516134 skin male and 5 month 114.95200000000001 SRR516122 skin male and 3.5 year 106.303 SRR516124 skin male and 3.5 year 106.243 SRR516129 skin male and 5 month 87.0169 SRR516126 skin male and 5 month 81.9006 SRR516128 skin male and 5 month 75.4006 SRR941749 anterior pectoral fin normal 69.9189 SRR516132 skin male and 5 month 67.3205 SRR516127 skin male and 5 month 65.7658 ERR023146 head kidney normal 60.9676 SRR516130 skin male and 5 month 50.7901 SRR1035239 liver transgenic mCherry control 40.5593 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 38.8267 SRR1205160 5dpf transgenic sqET20 and GFP+ 37.5565 SRR516135 skin male and 5 month 36.7477 SRR1562530 liver normal 35.2839 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 34.9009 SRR527834 head normal 30.9714 SRR941753 posterior pectoral fin normal 29.7317 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 29.2077 SRR1562528 eye normal 24.559 SRR1562529 intestine and pancreas normal 23.5108 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 23.2734 SRR1028002 head normal 23.2406 SRR891504 liver normal 19.1754 SRR1167753 embryo bacterial infection 18.6586 SRR1028003 head normal 18.133 SRR592700 pineal gland normal 17.9498 SRR942764 embryo myd88-/- 17.6826 SRR1167763 embryo ptpn6 morpholino and bacterial infection 17.5713 SRR1028004 head normal 16.9587 SRR942769 embryo myd88+/+ 16.8297 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 16.4152 SRR1291414 5 dpi normal 16.4077 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 16.0584 SRR1167752 embryo normal 15.9932 SRR1342217 embryo infection with Mycobacterium marinum 15.9707 ERR023145 heart normal 15.9673 SRR1167756 embryo mpeg1 morpholino 15.3709 SRR1039571 gastrointestinal diet 0.1 NPM 15.1313 SRR1523211 embryo control morpholino 14.9281 SRR1167757 embryo mpeg1 morpholino and bacterial infection 14.7057 SRR592702 pineal gland normal 14.5282 SRR1167762 embryo ptpn6 morpholino 14.5064 SRR1342216 embryo norml 14.4118 SRR630464 5 dpf injected epidermidis 14.1712 SRR1291417 5 dpi injected marinum 14.1641 SRR592703 pineal gland normal 13.523 SRR1534351 larvae 500 ug/l BDE47 treatment 13.4658 SRR1188148 embryo Control PBS 0.5 hpi 13.0355 SRR1188152 embryo Insulin 0.5 hpi 12.7935 SRR535850 larvae hoxb1b mut 12.759 SRR592701 pineal gland normal 12.6454 SRR630463 5 dpf normal 12.2561 SRR535848 larvae hoxb1b mut 12.0885 SRR535852 larvae hoxb1b mut 12.0232 SRR1342218 embryo marco morpholino 11.8118 SRR1534350 larvae 5 ug/l BDE47 treatment 11.607000000000001 SRR535847 larvae normal 11.4845 SRR1523214 embryo glut12 morpholino 11.4092 SRR1562532 spleen normal 11.2047 SRR1039573 gastrointestinal diet 0.75 NPM 11.1773 SRR1188160 embryo Insulin 4 hpi 11.0832 SRR535849 larvae normal 10.8729 SRR592698 pineal gland normal 10.7293 SRR831692 embryo normal 10.7059 SRR1708346 embryo SIBPS 10.5941 SRR535851 larvae normal 10.2173 SRR610742 3 dpf express NICD 10.1962 SRR372802 5 dpf normal 10.1011 SRR1562531 muscle normal 9.940010000000001 SRR610741 3 dpf express Ras 9.81121 SRR519727 6 dpf FETOH treatment 9.775139999999999 SRR1534349 larvae DMSO vehicle 9.697410000000001 SRR527833 5 dpf normal 9.6045 SRR610740 3 dpf normal 9.4662 SRR1104058 heart normal 9.335519999999999 SRR1188156 embryo Control PBS 4 hpi 9.297830000000001 SRR1048061 pineal gland dark 8.81042 SRR519732 7 dpf FETOH treatment 8.56253 SRR519747 6 dpf VD3 treatment 8.49955 SRR1104059 heart kctd10 mut 8.30158 SRR1708344 embryo MUTPS 8.11287 SRR1648854 brain normal 7.95229 SRR633550 larvae exposed to hypoxia stress 7.921819999999999 SRR633516 larvae normal 7.7431600000000005 SRR1648856 brain normal 7.56682 SRR519752 7 dpf VD3 treatment 7.462999999999999 SRR519722 4 dpf FETOH treatment 7.12718 SRR065197 3 dpf U1C knockout 6.9362 SRR519742 4 dpf VD3 treatment 6.894480000000001 SRR535978 larvae normal 6.842210000000001 SRR726540 5 dpf normal 6.800669999999999 SRR776509 embryo Salmonella infected 6.60951 SRR776510 embryo Salmonella infected and miR-146 knockdown 6.48983 SRR633544 larvae exposed to cold stress 6.37857 SRR1035237 liver transgenic UHRF1 6.30599 SRR776508 embryo miR-146 knockdown 5.95064 SRR527836 24hpf normal 5.94402 SRR1048059 pineal gland light 5.77039 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 5.75124 SRR535986 larvae nhsl1b mut 5.69501 SRR776507 embryo normal 5.49662 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 5.3189 SRR726542 5 dpf infection with control 5.1659 SRR592699 pineal gland normal 4.9570300000000005 SRR372800 2 dpf normal 4.6348400000000005 SRR1035981 13 hpf rx3+/+ or rx3+/- 4.54063 SRR749515 24 hpf eif3ha morphant 4.501869999999999 SRR1708345 embryo SIBAS 4.49078 SRR726541 5 dpf infection with Mycobacterium marinum 4.48506 SRR1205154 5dpf transgenic sqET20 4.46328 SRR527840 24hpf normal 4.33424 SRR065196 3 dpf normal 4.3267 SRR891512 blood normal 4.16507 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 4.00934 SRR1648855 brain normal 3.89385 SRR1647683 spleen SVCV treatment 3.8915800000000003 SRR658541 6 somite normal 3.84226 SRR658545 6 somite Gata6 morphant 3.83806 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 3.8212300000000003 SRR1035978 13 hpf rx3-/- 3.75211 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 3.73092 SRR527835 tail normal 3.7125199999999996 SRR519737 2 dpf VD3 treatment 3.5252 SRR535926 larvae normal 3.50671 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 3.47535 ERR023144 brain normal 3.4709 SRR519717 2 dpf FETOH treatment 3.46779 SRR1647682 spleen normal 3.4616599999999997 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 3.45781 SRR372798 28 hpf normal 3.4358199999999997 SRR535943 larvae vangl mut 3.42101 SRR658543 6 somite Gata5 morphan 3.39121 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 3.10384 SRR797914 embryo pbx2/4-MO 3.0343400000000003 SRR535890 larvae normal 2.97894 SRR797917 embryo pbx2/4-MO and prdm1-/- 2.96789 SRR891510 muscle normal 2.93844 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 2.87947 SRR1035984 13 hpf normal 2.8580200000000002 SRR594771 endothelium normal 2.8275 SRR535913 larvae krox mut 2.7833900000000003 SRR748489 egg normal 2.6794 SRR749514 24 hpf normal 2.54358 SRR797911 embryo prdm1-/- 2.54173 SRR1708343 embryo MUTAS 2.53209 SRR527844 24hpf normal 2.52159 SRR797908 embryo normal 2.49811 SRR038627 embryo control morpholino 2.49485 SRR1647680 head kidney SVCV treatment 2.42651 SRR658547 6 somite Gata5/6 morphant 2.40048 SRR1565817 brain normal 2.35463 SRR1647684 spleen SVCV treatment 2.3153900000000003 SRR527832 16-36 hpf normal 2.28169 SRR1647679 head kidney normal 2.0744599999999997 SRR1562533 testis normal 2.0192200000000002 SRR1647681 head kidney SVCV treatment 1.99567 SRR038626 embryo control morpholino and bacterial infection 1.8990599999999997 SRR800045 muscle normal 1.84485 SRR1565811 brain normal 1.81365 SRR1565813 brain normal 1.8099599999999998 SRR1565815 brain normal 1.75046 SRR1565819 brain normal 1.7481400000000002 SRR038624 embryo traf6 morpholino and bacterial infection 1.74298 SRR801555 embryo RPS19 morpholino 1.6155700000000002 SRR658535 bud Gata5 morphant 1.4965700000000002 SRR957180 heart 7 days after heart tip amputation 1.47575 SRR957181 heart normal 1.46387 SRR1569491 embryo normal 1.4205299999999998 SRR1005530 embryo RPL11 morpholino 1.40541 SRR658537 bud Gata6 morphant 1.3885399999999999 SRR1565809 brain normal 1.37816 SRR801556 embryo RPS19 and p53 morpholino 1.36901 SRR700534 heart control morpholino 1.3670799999999999 SRR1565807 brain normal 1.35113 SRR1005529 embryo control morpholino 1.3365 SRR801554 embryo control morpholino 1.33449 SRR1004788 larvae impdh1b morpholino 1.2878399999999999 SRR1565805 brain normal 1.28579 SRR700537 heart Gata4 morpholino 1.25791 SRR658533 bud normal 1.21943 SRR038625 embryo traf6 morpholino 1.1859899999999999 SRR658539 bud Gata5/6 morphant 1.12267 SRR1004786 larvae control morpholino 1.11955 SRR372796 bud normal 1.03128 SRR514028 retina control morpholino 0.8927709999999999 SRR594769 blood normal 0.8406889999999999 SRR1004785 larvae normal 0.838318 SRR891495 heart normal 0.731167 SRR1569495 embryo normal 0.622208 SRR1004789 larvae impdh2 morpholino 0.584204 SRR1004787 larvae impdh1a morpholino 0.570523 SRR891511 brain normal 0.5264810000000001 SRR748488 sperm normal 0.34775700000000004 ERR594418 retina transgenic flk1 and develop tumors 0.311308 ERR594416 retina transgenic flk1 0.18381199999999998 ERR594417 retina normal 0.168043 SRR514030 retina id2a morpholino 0.11270899999999999 SRR372791 dome normal 0.0220136 SRR1021215 sphere stage Mzeomesa 0.018447799999999997 SRR1021213 sphere stage normal 0.00673664 SRR1621206 embryo normal 0.00357806 SRR372793 shield normal 0.00305013 SRR1049814 256 cell normal 0.0005166869999999999