sample tissue condition fpkm SRR891511 brain normal 93.8339 SRR519732 7 dpf FETOH treatment 55.7562 SRR519747 6 dpf VD3 treatment 46.0015 SRR519727 6 dpf FETOH treatment 45.9656 SRR519752 7 dpf VD3 treatment 41.6821 SRR1048059 pineal gland light 31.8206 SRR1565811 brain normal 31.8088 SRR1291417 5 dpi injected marinum 31.3869 SRR1565809 brain normal 29.6528 SRR519742 4 dpf VD3 treatment 27.8599 SRR519722 4 dpf FETOH treatment 27.2714 SRR1565819 brain normal 27.15 SRR1565805 brain normal 25.7993 SRR1565817 brain normal 23.5778 SRR1565807 brain normal 23.3794 SRR1565815 brain normal 23.0726 SRR1188156 embryo Control PBS 4 hpi 22.8517 SRR1565813 brain normal 22.6792 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 21.5599 SRR1291414 5 dpi normal 21.1027 SRR942764 embryo myd88-/- 19.9359 SRR1648855 brain normal 19.8205 SRR519717 2 dpf FETOH treatment 17.9727 SRR726542 5 dpf infection with control 17.2512 SRR1167763 embryo ptpn6 morpholino and bacterial infection 17.0503 SRR942769 embryo myd88+/+ 16.7575 SRR1534351 larvae 500 ug/l BDE47 treatment 16.6919 SRR1188148 embryo Control PBS 0.5 hpi 16.4582 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 16.1776 SRR519737 2 dpf VD3 treatment 15.1921 SRR1648854 brain normal 14.6744 SRR1562532 spleen normal 14.13 SRR630464 5 dpf injected epidermidis 14.0792 SRR1167762 embryo ptpn6 morpholino 13.8096 SRR1167753 embryo bacterial infection 13.591 SRR1188152 embryo Insulin 0.5 hpi 12.8623 SRR1188160 embryo Insulin 4 hpi 11.133 SRR1342217 embryo infection with Mycobacterium marinum 11.0964 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 10.7804 SRR592703 pineal gland normal 10.4252 ERR594416 retina transgenic flk1 10.2608 SRR726541 5 dpf infection with Mycobacterium marinum 10.0659 SRR592700 pineal gland normal 9.8849 SRR535849 larvae normal 9.81948 SRR1534349 larvae DMSO vehicle 9.734119999999999 SRR630463 5 dpf normal 9.59037 SRR1028004 head normal 9.47103 SRR065196 3 dpf normal 9.44162 SRR1342216 embryo norml 9.395380000000001 SRR1342218 embryo marco morpholino 9.37552 SRR535850 larvae hoxb1b mut 9.329460000000001 SRR1534350 larvae 5 ug/l BDE47 treatment 9.270380000000001 SRR726540 5 dpf normal 9.18778 SRR1167752 embryo normal 9.08041 SRR1523211 embryo control morpholino 8.833689999999999 SRR535848 larvae hoxb1b mut 8.60829 SRR527834 head normal 8.56729 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 8.51437 SRR535852 larvae hoxb1b mut 8.38312 SRR633516 larvae normal 8.30137 SRR527833 5 dpf normal 8.236080000000001 SRR633550 larvae exposed to hypoxia stress 7.86605 SRR633544 larvae exposed to cold stress 7.79817 SRR1167756 embryo mpeg1 morpholino 7.775919999999999 SRR1523214 embryo glut12 morpholino 7.69442 SRR065197 3 dpf U1C knockout 7.62896 ERR594418 retina transgenic flk1 and develop tumors 7.617000000000001 SRR831692 embryo normal 7.47815 SRR535851 larvae normal 7.399760000000001 SRR535847 larvae normal 7.37179 SRR610742 3 dpf express NICD 7.175730000000001 SRR592699 pineal gland normal 7.14195 SRR1048061 pineal gland dark 6.79208 SRR891510 muscle normal 6.7027 SRR1167757 embryo mpeg1 morpholino and bacterial infection 6.65988 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 6.3969 SRR594771 endothelium normal 6.19951 SRR1028003 head normal 6.03109 SRR1028002 head normal 5.9223 SRR1569495 embryo normal 5.65827 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 5.53938 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 5.43912 ERR023144 brain normal 5.20095 SRR1648856 brain normal 5.18179 SRR1569491 embryo normal 4.912030000000001 SRR592701 pineal gland normal 4.888380000000001 SRR592702 pineal gland normal 4.82388 SRR610740 3 dpf normal 4.75635 SRR700537 heart Gata4 morpholino 4.6508400000000005 ERR594417 retina normal 4.64995 SRR610741 3 dpf express Ras 4.5854099999999995 SRR592698 pineal gland normal 4.36855 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 4.26829 SRR700534 heart control morpholino 3.8915300000000004 SRR372802 5 dpf normal 3.1530099999999996 SRR1205154 5dpf transgenic sqET20 2.94951 SRR1005529 embryo control morpholino 2.85311 SRR801554 embryo control morpholino 2.84882 SRR1005530 embryo RPL11 morpholino 2.55444 SRR1104058 heart normal 2.44496 SRR797914 embryo pbx2/4-MO 2.32128 SRR776509 embryo Salmonella infected 2.28648 SRR527832 16-36 hpf normal 2.24744 SRR776508 embryo miR-146 knockdown 2.21727 SRR527836 24hpf normal 2.0577099999999997 SRR594769 blood normal 2.02363 SRR801556 embryo RPS19 and p53 morpholino 1.9134900000000001 SRR038625 embryo traf6 morpholino 1.7893 SRR797911 embryo prdm1-/- 1.70025 SRR535986 larvae nhsl1b mut 1.68205 SRR038624 embryo traf6 morpholino and bacterial infection 1.61301 SRR527840 24hpf normal 1.60275 SRR801555 embryo RPS19 morpholino 1.57512 SRR797908 embryo normal 1.57218 SRR527844 24hpf normal 1.53942 SRR776507 embryo normal 1.42736 SRR1562528 eye normal 1.41865 SRR1104059 heart kctd10 mut 1.39068 SRR038627 embryo control morpholino 1.36429 SRR514028 retina control morpholino 1.3463100000000001 SRR372800 2 dpf normal 1.3075299999999999 SRR514030 retina id2a morpholino 1.3006 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 1.25512 SRR038626 embryo control morpholino and bacterial infection 1.15678 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 0.987086 SRR797917 embryo pbx2/4-MO and prdm1-/- 0.969247 SRR776510 embryo Salmonella infected and miR-146 knockdown 0.960425 SRR535890 larvae normal 0.9265950000000001 SRR1708345 embryo SIBAS 0.859757 SRR1004787 larvae impdh1a morpholino 0.792683 SRR1708343 embryo MUTAS 0.622639 SRR535978 larvae normal 0.54577 SRR535943 larvae vangl mut 0.544962 SRR535913 larvae krox mut 0.5342210000000001 SRR1004788 larvae impdh1b morpholino 0.52315 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 0.521999 SRR1708346 embryo SIBPS 0.423874 SRR372798 28 hpf normal 0.42355699999999996 SRR1004785 larvae normal 0.420013 SRR658539 bud Gata5/6 morphant 0.351362 SRR535926 larvae normal 0.340504 SRR749514 24 hpf normal 0.29844699999999996 SRR1021213 sphere stage normal 0.282441 SRR1708344 embryo MUTPS 0.271435 SRR658535 bud Gata5 morphant 0.23294 SRR1004786 larvae control morpholino 0.232515 SRR658543 6 somite Gata5 morphan 0.223966 SRR372793 shield normal 0.21873099999999998 SRR891495 heart normal 0.20960399999999998 SRR1004789 larvae impdh2 morpholino 0.20258099999999998 SRR749515 24 hpf eif3ha morphant 0.198773 SRR1035984 13 hpf normal 0.192497 SRR516127 skin male and 5 month 0.186587 SRR658547 6 somite Gata5/6 morphant 0.160699 SRR658541 6 somite normal 0.147542 SRR658537 bud Gata6 morphant 0.136504 SRR1035981 13 hpf rx3+/+ or rx3+/- 0.12333499999999999 SRR1035239 liver transgenic mCherry control 0.12015899999999999 SRR1021215 sphere stage Mzeomesa 0.11780399999999999 SRR527835 tail normal 0.100328 SRR372791 dome normal 0.09703200000000001 ERR023143 swim bladder normal 0.0940294 SRR1039573 gastrointestinal diet 0.75 NPM 0.08283910000000001 SRR800043 sphere stage normal 0.0819707 SRR1647681 head kidney SVCV treatment 0.07672029999999999 SRR372796 bud normal 0.0749422 SRR1647682 spleen normal 0.0687677 SRR1299126 caudal fin One day time after treatment 0.06783610000000001 SRR957181 heart normal 0.058289 SRR658533 bud normal 0.05510840000000001 SRR658545 6 somite Gata6 morphant 0.05133340000000001 SRR1035978 13 hpf rx3-/- 0.0429884 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.0401038 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.0384126 SRR1562533 testis normal 0.0350177 SRR372789 1K cell normal 0.0257824 SRR1049814 256 cell normal 0.0208648 SRR1621206 embryo normal 0.0195885