sample tissue condition fpkm SRR800046 sphere stage 5azaCyD treatment 21.9305 SRR658537 bud Gata6 morphant 19.4873 SRR800043 sphere stage normal 17.651 SRR800037 egg normal 15.2089 SRR514030 retina id2a morpholino 12.3847 SRR516132 skin male and 5 month 11.7444 SRR514028 retina control morpholino 11.405 SRR594771 endothelium normal 10.0476 SRR800045 muscle normal 10.0451 ERR594417 retina normal 9.2844 SRR941753 posterior pectoral fin normal 8.38565 ERR594416 retina transgenic flk1 7.9214899999999995 SRR633544 larvae exposed to cold stress 7.3994800000000005 SRR941749 anterior pectoral fin normal 7.218960000000001 SRR527834 head normal 6.978960000000001 SRR594769 blood normal 6.8879399999999995 SRR1188156 embryo Control PBS 4 hpi 6.24051 SRR527832 16-36 hpf normal 5.8383 SRR516135 skin male and 5 month 5.4892199999999995 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 5.46331 SRR749515 24 hpf eif3ha morphant 5.37268 SRR800049 sphere stage control treatment 5.22686 SRR1647682 spleen normal 4.90953 SRR519717 2 dpf FETOH treatment 4.67249 SRR519737 2 dpf VD3 treatment 4.59631 SRR797917 embryo pbx2/4-MO and prdm1-/- 4.48562 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 4.33573 SRR519752 7 dpf VD3 treatment 4.25566 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 4.17868 SRR1167763 embryo ptpn6 morpholino and bacterial infection 4.14226 SRR519747 6 dpf VD3 treatment 4.05996 SRR065197 3 dpf U1C knockout 4.0283 ERR023144 brain normal 3.8500400000000004 SRR519732 7 dpf FETOH treatment 3.8454 SRR797908 embryo normal 3.78379 SRR1562528 eye normal 3.74115 SRR797914 embryo pbx2/4-MO 3.72335 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 3.64261 SRR519727 6 dpf FETOH treatment 3.6235699999999995 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 3.6002400000000003 SRR1188152 embryo Insulin 0.5 hpi 3.5442400000000003 SRR516122 skin male and 3.5 year 3.5342300000000004 SRR519742 4 dpf VD3 treatment 3.4678 SRR1028003 head normal 3.3990699999999996 SRR535851 larvae normal 3.3328 SRR1021215 sphere stage Mzeomesa 3.2800599999999998 SRR535986 larvae nhsl1b mut 3.27502 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 3.24898 SRR1205154 5dpf transgenic sqET20 3.2360900000000004 SRR1648855 brain normal 3.18352 SRR797911 embryo prdm1-/- 3.1076099999999998 SRR519722 4 dpf FETOH treatment 3.0850299999999997 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 3.06757 SRR592700 pineal gland normal 3.06472 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 3.06434 SRR1188148 embryo Control PBS 0.5 hpi 3.04048 SRR516130 skin male and 5 month 3.0299400000000003 SRR516123 skin male and 3.5 year 3.00618 SRR1291417 5 dpi injected marinum 2.96705 SRR726541 5 dpf infection with Mycobacterium marinum 2.90917 SRR1035239 liver transgenic mCherry control 2.8395200000000003 SRR726540 5 dpf normal 2.79146 SRR535849 larvae normal 2.78978 ERR594418 retina transgenic flk1 and develop tumors 2.77595 SRR942764 embryo myd88-/- 2.74648 SRR535890 larvae normal 2.7229099999999997 SRR527833 5 dpf normal 2.7152 SRR535848 larvae hoxb1b mut 2.69208 SRR831692 embryo normal 2.67845 SRR1299124 caudal fin Zero day time after treatment 2.67048 SRR527835 tail normal 2.66991 SRR1205160 5dpf transgenic sqET20 and GFP+ 2.65385 SRR535913 larvae krox mut 2.64665 SRR1035978 13 hpf rx3-/- 2.61875 SRR516125 skin male and 3.5 year 2.58433 SRR1028002 head normal 2.5274099999999997 SRR700537 heart Gata4 morpholino 2.52612 SRR535850 larvae hoxb1b mut 2.516 SRR1562532 spleen normal 2.50447 SRR726542 5 dpf infection with control 2.4738700000000002 SRR592701 pineal gland normal 2.46372 SRR1299129 caudal fin Seven days time after treatment 2.43092 SRR592703 pineal gland normal 2.4165099999999997 SRR633550 larvae exposed to hypoxia stress 2.36111 SRR535943 larvae vangl mut 2.33258 SRR516126 skin male and 5 month 2.32395 SRR957180 heart 7 days after heart tip amputation 2.32 SRR1342218 embryo marco morpholino 2.28495 SRR1647679 head kidney normal 2.26254 SRR592699 pineal gland normal 2.2422400000000002 SRR610742 3 dpf express NICD 2.2178 SRR658543 6 somite Gata5 morphan 2.20324 SRR535926 larvae normal 2.12872 SRR1647680 head kidney SVCV treatment 2.0983099999999997 SRR942769 embryo myd88+/+ 2.0912900000000003 SRR891511 brain normal 2.07804 SRR535847 larvae normal 2.04294 SRR1562533 testis normal 2.0369 SRR592702 pineal gland normal 1.9912900000000002 SRR1562529 intestine and pancreas normal 1.93409 SRR1647684 spleen SVCV treatment 1.92877 SRR658539 bud Gata5/6 morphant 1.90665 SRR749514 24 hpf normal 1.90051 SRR1562530 liver normal 1.83427 SRR065196 3 dpf normal 1.72947 SRR372793 shield normal 1.6609 SRR592698 pineal gland normal 1.66029 ERR023146 head kidney normal 1.6585400000000001 SRR1028004 head normal 1.6473200000000001 SRR1648854 brain normal 1.63624 SRR535852 larvae hoxb1b mut 1.6309799999999999 SRR1104058 heart normal 1.61145 SRR1569495 embryo normal 1.6049 SRR1167753 embryo bacterial infection 1.5932899999999999 SRR372791 dome normal 1.5809799999999998 SRR038624 embryo traf6 morpholino and bacterial infection 1.5484799999999999 SRR516128 skin male and 5 month 1.5426799999999998 SRR1035981 13 hpf rx3+/+ or rx3+/- 1.51686 SRR1039571 gastrointestinal diet 0.1 NPM 1.5130000000000001 SRR1167757 embryo mpeg1 morpholino and bacterial infection 1.50569 SRR1188160 embryo Insulin 4 hpi 1.50231 SRR516129 skin male and 5 month 1.48383 SRR1167762 embryo ptpn6 morpholino 1.39306 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 1.38198 SRR1167752 embryo normal 1.38089 SRR1299125 caudal fin Half day time after treatment 1.36897 SRR1299128 caudal fin Three days time after treatment 1.3622100000000001 SRR630463 5 dpf normal 1.3309600000000001 SRR516127 skin male and 5 month 1.32594 SRR1342217 embryo infection with Mycobacterium marinum 1.32515 SRR1647683 spleen SVCV treatment 1.3200399999999999 SRR891510 muscle normal 1.28433 SRR1299127 caudal fin Two days time after treatment 1.27177 SRR658541 6 somite normal 1.27055 SRR1342216 embryo norml 1.25791 SRR372800 2 dpf normal 1.25035 SRR1021213 sphere stage normal 1.2286299999999999 SRR700534 heart control morpholino 1.2282 SRR630464 5 dpf injected epidermidis 1.2267700000000001 SRR957181 heart normal 1.21549 SRR633516 larvae normal 1.1844299999999999 ERR023143 swim bladder normal 1.15534 SRR1299126 caudal fin One day time after treatment 1.14351 SRR748491 germ ring normal 1.11711 SRR372802 5 dpf normal 1.11666 SRR1004788 larvae impdh1b morpholino 1.11432 SRR1167756 embryo mpeg1 morpholino 1.10923 SRR372798 28 hpf normal 1.07687 SRR1647681 head kidney SVCV treatment 1.07229 SRR658545 6 somite Gata6 morphant 1.03874 SRR516133 skin male and 5 month 1.0165 SRR1004786 larvae control morpholino 0.976402 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 0.9710260000000001 SRR372796 bud normal 0.960563 SRR1104059 heart kctd10 mut 0.959419 SRR1708345 embryo SIBAS 0.9548200000000001 SRR1035237 liver transgenic UHRF1 0.9248139999999999 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 0.91856 SRR1562531 muscle normal 0.911819 ERR023145 heart normal 0.8907719999999999 SRR658533 bud normal 0.8464969999999999 SRR535978 larvae normal 0.832249 SRR1565817 brain normal 0.802067 SRR891495 heart normal 0.790464 SRR038625 embryo traf6 morpholino 0.769559 SRR1004789 larvae impdh2 morpholino 0.747855 SRR038626 embryo control morpholino and bacterial infection 0.732531 SRR1565809 brain normal 0.71607 SRR886456 256 cell 4-thio-UTP metabolic labeling 0.7021029999999999 SRR1523214 embryo glut12 morpholino 0.697087 SRR1534351 larvae 500 ug/l BDE47 treatment 0.697016 SRR1565819 brain normal 0.677871 SRR1534349 larvae DMSO vehicle 0.6367470000000001 SRR1565807 brain normal 0.6152989999999999 SRR1534350 larvae 5 ug/l BDE47 treatment 0.604035 SRR1039573 gastrointestinal diet 0.75 NPM 0.5985560000000001 SRR1048061 pineal gland dark 0.5932569999999999 SRR516121 skin male and 3.5 year 0.558986 SRR658547 6 somite Gata5/6 morphant 0.511347 SRR1291414 5 dpi normal 0.49776800000000004 SRR1523211 embryo control morpholino 0.483484 SRR1565815 brain normal 0.483415 SRR1565811 brain normal 0.474649 SRR1565813 brain normal 0.471713 SRR1708344 embryo MUTPS 0.470861 SRR610740 3 dpf normal 0.44562399999999996 SRR516134 skin male and 5 month 0.44437600000000005 SRR1565805 brain normal 0.430666 SRR776509 embryo Salmonella infected 0.402028 SRR1005530 embryo RPL11 morpholino 0.3943 SRR1004785 larvae normal 0.37650500000000003 SRR1035984 13 hpf normal 0.338547 SRR527844 24hpf normal 0.336752 SRR516124 skin male and 3.5 year 0.319196 SRR038627 embryo control morpholino 0.31751599999999996 SRR1708346 embryo SIBPS 0.312882 SRR610741 3 dpf express Ras 0.277471 SRR516131 skin male and 5 month 0.272515 SRR1708343 embryo MUTAS 0.272277 SRR776508 embryo miR-146 knockdown 0.26796 SRR527840 24hpf normal 0.252894 SRR1569491 embryo normal 0.20618699999999998 SRR658535 bud Gata5 morphant 0.135131 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.133055 SRR527836 24hpf normal 0.0810188 SRR1648856 brain normal 0.0662879