sample tissue condition fpkm SRR514030 retina id2a morpholino 59.5921 SRR514028 retina control morpholino 34.0561 SRR594771 endothelium normal 17.455 SRR594769 blood normal 13.8263 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 11.8182 SRR886455 128 cell 4-thio-UTP metabolic labeling 11.7006 SRR519717 2 dpf FETOH treatment 10.2315 SRR1205154 5dpf transgenic sqET20 10.0595 SRR886456 256 cell 4-thio-UTP metabolic labeling 9.81695 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 9.74573 SRR1104059 heart kctd10 mut 8.83992 SRR519737 2 dpf VD3 treatment 8.81193 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 8.757819999999999 SRR1569495 embryo normal 7.944660000000001 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 7.2725 SRR797911 embryo prdm1-/- 7.096 SRR797914 embryo pbx2/4-MO 6.947760000000001 SRR797908 embryo normal 6.77924 SRR658541 6 somite normal 6.6773 SRR1104058 heart normal 6.58715 SRR658543 6 somite Gata5 morphan 6.5370800000000004 SRR797917 embryo pbx2/4-MO and prdm1-/- 6.41014 SRR535913 larvae krox mut 6.35268 SRR535890 larvae normal 6.35116 SRR1205160 5dpf transgenic sqET20 and GFP+ 6.3051699999999995 SRR1035978 13 hpf rx3-/- 5.96864 SRR658545 6 somite Gata6 morphant 5.59208 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 5.54277 SRR1035981 13 hpf rx3+/+ or rx3+/- 5.50169 SRR749515 24 hpf eif3ha morphant 5.46623 SRR658547 6 somite Gata5/6 morphant 5.40584 SRR519742 4 dpf VD3 treatment 5.14016 SRR749514 24 hpf normal 4.8579300000000005 SRR038627 embryo control morpholino 4.77128 ERR023146 head kidney normal 4.70369 SRR038625 embryo traf6 morpholino 4.67393 SRR527836 24hpf normal 4.55069 SRR1647680 head kidney SVCV treatment 4.5281400000000005 SRR535943 larvae vangl mut 4.42229 SRR519722 4 dpf FETOH treatment 4.38877 SRR527840 24hpf normal 4.2419 SRR1708345 embryo SIBAS 4.1965 SRR519747 6 dpf VD3 treatment 4.11752 SRR941753 posterior pectoral fin normal 4.08686 SRR535926 larvae normal 4.06376 SRR516123 skin male and 3.5 year 4.02603 SRR527832 16-36 hpf normal 3.9887599999999996 SRR726540 5 dpf normal 3.9836300000000002 SRR527844 24hpf normal 3.94792 SRR516126 skin male and 5 month 3.84555 SRR1035984 13 hpf normal 3.8420400000000003 SRR1004786 larvae control morpholino 3.83616 SRR941749 anterior pectoral fin normal 3.71014 SRR516128 skin male and 5 month 3.7099300000000004 SRR658537 bud Gata6 morphant 3.67015 SRR527833 5 dpf normal 3.6694400000000003 SRR516129 skin male and 5 month 3.6425199999999998 SRR038624 embryo traf6 morpholino and bacterial infection 3.6089300000000004 SRR633516 larvae normal 3.56169 SRR516127 skin male and 5 month 3.5593800000000004 SRR831692 embryo normal 3.4757300000000004 SRR1708343 embryo MUTAS 3.44835 SRR658535 bud Gata5 morphant 3.4384699999999997 SRR535848 larvae hoxb1b mut 3.42294 SRR038626 embryo control morpholino and bacterial infection 3.3984099999999997 SRR516121 skin male and 3.5 year 3.3752699999999995 SRR633550 larvae exposed to hypoxia stress 3.36826 SRR1004785 larvae normal 3.33782 SRR535852 larvae hoxb1b mut 3.32051 SRR516134 skin male and 5 month 3.31544 SRR516122 skin male and 3.5 year 3.3121099999999997 SRR519752 7 dpf VD3 treatment 3.3040599999999998 SRR658533 bud normal 3.30015 SRR535847 larvae normal 3.27216 SRR535849 larvae normal 3.22085 SRR535851 larvae normal 3.19825 SRR726542 5 dpf infection with control 3.15623 SRR776509 embryo Salmonella infected 3.12411 SRR633544 larvae exposed to cold stress 3.10283 SRR519727 6 dpf FETOH treatment 3.09291 SRR535850 larvae hoxb1b mut 3.08505 SRR1004788 larvae impdh1b morpholino 3.05213 SRR516130 skin male and 5 month 3.0021299999999997 SRR1647679 head kidney normal 2.99193 SRR516135 skin male and 5 month 2.93522 SRR1005529 embryo control morpholino 2.9132700000000002 SRR801554 embryo control morpholino 2.90882 SRR658539 bud Gata5/6 morphant 2.89125 SRR801556 embryo RPS19 and p53 morpholino 2.8427599999999997 SRR748491 germ ring normal 2.8401400000000003 SRR1004787 larvae impdh1a morpholino 2.82216 SRR1565817 brain normal 2.82016 SRR516124 skin male and 3.5 year 2.8063700000000003 SRR886457 512 cell 4-thio-UTP metabolic labeling 2.77788 SRR1565819 brain normal 2.71664 SRR776507 embryo normal 2.68226 SRR801555 embryo RPS19 morpholino 2.66571 SRR516133 skin male and 5 month 2.55023 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 2.5477 SRR726541 5 dpf infection with Mycobacterium marinum 2.54377 SRR610740 3 dpf normal 2.54259 SRR065196 3 dpf normal 2.49205 SRR1569491 embryo normal 2.42541 SRR1028004 head normal 2.41381 SRR700537 heart Gata4 morpholino 2.41269 SRR1167756 embryo mpeg1 morpholino 2.3926 SRR610742 3 dpf express NICD 2.36971 SRR1565815 brain normal 2.35047 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 2.31846 SRR527834 head normal 2.26037 SRR1167757 embryo mpeg1 morpholino and bacterial infection 2.23631 SRR1647681 head kidney SVCV treatment 2.23322 SRR1565807 brain normal 2.18276 SRR776508 embryo miR-146 knockdown 2.15427 SRR1004789 larvae impdh2 morpholino 2.15196 SRR519732 7 dpf FETOH treatment 2.12161 SRR1565809 brain normal 2.09177 SRR1005530 embryo RPL11 morpholino 2.07039 SRR1188156 embryo Control PBS 4 hpi 2.04743 SRR1565805 brain normal 2.03586 SRR1188160 embryo Insulin 4 hpi 1.9986 SRR1342218 embryo marco morpholino 1.9768700000000001 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 1.9746 SRR1565811 brain normal 1.97118 SRR535986 larvae nhsl1b mut 1.96653 SRR1188148 embryo Control PBS 0.5 hpi 1.9545400000000002 SRR516132 skin male and 5 month 1.95416 SRR1342216 embryo norml 1.94825 SRR1167752 embryo normal 1.9294900000000001 SRR942769 embryo myd88+/+ 1.9264700000000001 SRR1565813 brain normal 1.9154099999999998 SRR1708346 embryo SIBPS 1.8849200000000002 SRR1167763 embryo ptpn6 morpholino and bacterial infection 1.8697599999999999 SRR065197 3 dpf U1C knockout 1.8508 ERR023144 brain normal 1.8496400000000002 SRR1167753 embryo bacterial infection 1.7981599999999998 SRR610741 3 dpf express Ras 1.7831599999999999 SRR1028003 head normal 1.78279 SRR1188152 embryo Insulin 0.5 hpi 1.77214 ERR594418 retina transgenic flk1 and develop tumors 1.75004 SRR1028002 head normal 1.74468 SRR630464 5 dpf injected epidermidis 1.73521 SRR592699 pineal gland normal 1.70898 ERR023143 swim bladder normal 1.68787 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 1.62744 SRR630463 5 dpf normal 1.60933 SRR776510 embryo Salmonella infected and miR-146 knockdown 1.60661 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 1.5966 SRR1342217 embryo infection with Mycobacterium marinum 1.5892899999999999 SRR1647682 spleen normal 1.57394 SRR1021215 sphere stage Mzeomesa 1.5516299999999998 SRR1048059 pineal gland light 1.55054 SRR516131 skin male and 5 month 1.46747 SRR942764 embryo myd88-/- 1.42184 SRR1299129 caudal fin Seven days time after treatment 1.42029 SRR1708344 embryo MUTPS 1.4108 SRR1167762 embryo ptpn6 morpholino 1.3835 SRR891495 heart normal 1.37893 SRR1647683 spleen SVCV treatment 1.36586 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 1.33105 SRR592703 pineal gland normal 1.2494399999999999 SRR516125 skin male and 3.5 year 1.24797 SRR1562529 intestine and pancreas normal 1.2429700000000001 SRR527835 tail normal 1.2232299999999998 SRR535978 larvae normal 1.22054 SRR1291417 5 dpi injected marinum 1.2175 SRR1048061 pineal gland dark 1.18698 SRR592698 pineal gland normal 1.1635799999999998 SRR1299128 caudal fin Three days time after treatment 1.16178 SRR700534 heart control morpholino 1.13002 SRR1523214 embryo glut12 morpholino 1.0842100000000001 SRR1562531 muscle normal 1.05962 SRR1299127 caudal fin Two days time after treatment 1.02649 SRR1299125 caudal fin Half day time after treatment 1.01119 SRR592702 pineal gland normal 0.9970040000000001 SRR1021213 sphere stage normal 0.9885700000000001 SRR592700 pineal gland normal 0.9796870000000001 SRR1299126 caudal fin One day time after treatment 0.973416 SRR1534349 larvae DMSO vehicle 0.959417 ERR023145 heart normal 0.874383 SRR1039571 gastrointestinal diet 0.1 NPM 0.8713049999999999 SRR592701 pineal gland normal 0.848833 SRR1299124 caudal fin Zero day time after treatment 0.8473639999999999 SRR891512 blood normal 0.821378 SRR748489 egg normal 0.819887 SRR1291414 5 dpi normal 0.815822 SRR800046 sphere stage 5azaCyD treatment 0.8045760000000001 ERR594416 retina transgenic flk1 0.792273 SRR1562532 spleen normal 0.783281 SRR1534350 larvae 5 ug/l BDE47 treatment 0.770938 SRR1562528 eye normal 0.749584 SRR1647684 spleen SVCV treatment 0.688922 SRR1035239 liver transgenic mCherry control 0.682429 SRR1523211 embryo control morpholino 0.6509550000000001 SRR891511 brain normal 0.600961 SRR748488 sperm normal 0.576101 SRR748490 1 kcell normal 0.55133 SRR800049 sphere stage control treatment 0.538858 SRR1562530 liver normal 0.513558 SRR1534351 larvae 500 ug/l BDE47 treatment 0.5117079999999999 SRR1562533 testis normal 0.5085930000000001 SRR800043 sphere stage normal 0.50797 SRR1035237 liver transgenic UHRF1 0.45595399999999997 SRR1039573 gastrointestinal diet 0.75 NPM 0.342686 SRR891510 muscle normal 0.246086 ERR594417 retina normal 0.2455 SRR800037 egg normal 0.175244 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.0812019 SRR800045 muscle normal 0.08037799999999999 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.0677188 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.030267000000000002 SRR372793 shield normal 0.0193429 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.0135689 SRR957181 heart normal 0.00959636 SRR1648856 brain normal 0.00494685 SRR372796 bud normal 0.00377631 SRR372791 dome normal 0.0027329