sample tissue condition fpkm SRR1708345 embryo SIBAS 44.8742 SRR658533 bud normal 43.2341 SRR658535 bud Gata5 morphant 35.9282 SRR658547 6 somite Gata5/6 morphant 32.3916 SRR658541 6 somite normal 32.2479 SRR658539 bud Gata5/6 morphant 31.0826 SRR776507 embryo normal 30.0325 SRR658545 6 somite Gata6 morphant 29.9781 SRR594771 endothelium normal 29.5891 SRR1569491 embryo normal 28.0746 SRR1708343 embryo MUTAS 27.796999999999997 SRR658537 bud Gata6 morphant 27.5209 SRR749514 24 hpf normal 27.4802 SRR527840 24hpf normal 26.8559 SRR748491 germ ring normal 26.8012 SRR776508 embryo miR-146 knockdown 26.752 SRR527844 24hpf normal 26.2496 SRR535978 larvae normal 25.471999999999998 SRR514028 retina control morpholino 24.1877 SRR527836 24hpf normal 23.6348 SRR658543 6 somite Gata5 morphan 23.1287 SRR1035981 13 hpf rx3+/+ or rx3+/- 22.9259 SRR1035978 13 hpf rx3-/- 22.6337 SRR700537 heart Gata4 morpholino 22.4905 SRR1104058 heart normal 22.2594 SRR749515 24 hpf eif3ha morphant 22.0761 SRR776510 embryo Salmonella infected and miR-146 knockdown 22.0272 SRR776509 embryo Salmonella infected 20.9699 SRR1004785 larvae normal 20.0206 SRR1205154 5dpf transgenic sqET20 19.9693 SRR1708346 embryo SIBPS 19.4483 SRR1104059 heart kctd10 mut 19.4017 SRR535986 larvae nhsl1b mut 19.0771 SRR700534 heart control morpholino 18.8458 SRR1004786 larvae control morpholino 18.7183 SRR1569495 embryo normal 18.6006 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 18.2965 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 17.4607 SRR1004788 larvae impdh1b morpholino 17.2505 SRR797911 embryo prdm1-/- 15.8657 SRR1035984 13 hpf normal 15.6945 SRR797908 embryo normal 15.543 SRR038627 embryo control morpholino 14.8893 SRR1708344 embryo MUTPS 14.6276 SRR630464 5 dpf injected epidermidis 14.5846 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 14.0814 SRR038625 embryo traf6 morpholino 13.5688 SRR519717 2 dpf FETOH treatment 13.5084 SRR797914 embryo pbx2/4-MO 13.339 SRR1167752 embryo normal 13.2905 SRR797917 embryo pbx2/4-MO and prdm1-/- 12.931 SRR519737 2 dpf VD3 treatment 12.8822 SRR1005529 embryo control morpholino 12.7866 SRR801554 embryo control morpholino 12.7673 SRR630463 5 dpf normal 12.6339 SRR527832 16-36 hpf normal 12.5812 SRR514030 retina id2a morpholino 12.4548 SRR535943 larvae vangl mut 11.8261 SRR594769 blood normal 11.6921 ERR594418 retina transgenic flk1 and develop tumors 11.5827 SRR1299128 caudal fin Three days time after treatment 11.297 SRR1004787 larvae impdh1a morpholino 10.940999999999999 SRR1299127 caudal fin Two days time after treatment 10.7622 SRR065196 3 dpf normal 10.7106 SRR535913 larvae krox mut 10.4281 SRR535926 larvae normal 10.3716 SRR1021215 sphere stage Mzeomesa 10.3635 SRR1342218 embryo marco morpholino 10.1922 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 10.1646 SRR1167753 embryo bacterial infection 10.1302 SRR1342216 embryo norml 9.99575 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 9.93211 SRR942769 embryo myd88+/+ 9.84888 SRR038626 embryo control morpholino and bacterial infection 9.51912 SRR1523214 embryo glut12 morpholino 9.288260000000001 SRR800046 sphere stage 5azaCyD treatment 9.24981 SRR1342217 embryo infection with Mycobacterium marinum 9.01507 SRR535890 larvae normal 8.868160000000001 SRR1523211 embryo control morpholino 8.657969999999999 SRR1299129 caudal fin Seven days time after treatment 8.65059 SRR1167756 embryo mpeg1 morpholino 8.59442 SRR1167757 embryo mpeg1 morpholino and bacterial infection 8.57925 SRR1188152 embryo Insulin 0.5 hpi 8.388819999999999 SRR1291414 5 dpi normal 8.298739999999999 SRR942764 embryo myd88-/- 8.25335 SRR1167762 embryo ptpn6 morpholino 8.21508 SRR831692 embryo normal 7.91556 SRR038624 embryo traf6 morpholino and bacterial infection 7.66281 SRR1004789 larvae impdh2 morpholino 7.28291 SRR1188148 embryo Control PBS 0.5 hpi 7.2728399999999995 SRR610742 3 dpf express NICD 7.2341 SRR610740 3 dpf normal 7.189 SRR527833 5 dpf normal 7.02566 SRR1167763 embryo ptpn6 morpholino and bacterial infection 6.96062 SRR801556 embryo RPS19 and p53 morpholino 6.81601 SRR1291417 5 dpi injected marinum 6.7862800000000005 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 6.780539999999999 SRR516127 skin male and 5 month 6.58812 SRR1188160 embryo Insulin 4 hpi 6.47715 SRR633516 larvae normal 6.38323 SRR1021213 sphere stage normal 6.25636 SRR610741 3 dpf express Ras 6.23201 SRR633550 larvae exposed to hypoxia stress 6.12015 SRR1005530 embryo RPL11 morpholino 6.11679 SRR1534350 larvae 5 ug/l BDE47 treatment 5.98877 SRR065197 3 dpf U1C knockout 5.8159 SRR1299126 caudal fin One day time after treatment 5.6051 SRR726540 5 dpf normal 5.479 SRR801555 embryo RPS19 morpholino 5.19604 SRR535852 larvae hoxb1b mut 4.98805 SRR535849 larvae normal 4.88485 SRR519742 4 dpf VD3 treatment 4.83344 ERR023144 brain normal 4.82621 SRR726542 5 dpf infection with control 4.77913 SRR1188156 embryo Control PBS 4 hpi 4.75289 SRR1565813 brain normal 4.675680000000001 SRR519747 6 dpf VD3 treatment 4.63858 SRR519722 4 dpf FETOH treatment 4.51271 SRR1534349 larvae DMSO vehicle 4.50221 SRR633544 larvae exposed to cold stress 4.24043 SRR516131 skin male and 5 month 4.1491 SRR535848 larvae hoxb1b mut 4.1334 SRR535850 larvae hoxb1b mut 4.13171 SRR535851 larvae normal 4.0724599999999995 SRR535847 larvae normal 3.81751 SRR1028003 head normal 3.72609 SRR1028004 head normal 3.70203 SRR1565805 brain normal 3.7016400000000003 SRR1565815 brain normal 3.6981599999999997 SRR1299125 caudal fin Half day time after treatment 3.6248199999999997 SRR519727 6 dpf FETOH treatment 3.54956 SRR1565807 brain normal 3.4495400000000003 SRR1028002 head normal 3.41779 SRR519752 7 dpf VD3 treatment 3.01168 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 2.99952 SRR1565817 brain normal 2.9433700000000003 SRR1565819 brain normal 2.89264 SRR726541 5 dpf infection with Mycobacterium marinum 2.79869 SRR800049 sphere stage control treatment 2.78828 SRR516130 skin male and 5 month 2.73398 SRR516124 skin male and 3.5 year 2.63405 SRR516123 skin male and 3.5 year 2.62633 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 2.6069400000000003 SRR519732 7 dpf FETOH treatment 2.57042 SRR1565809 brain normal 2.56875 SRR1534351 larvae 500 ug/l BDE47 treatment 2.47125 SRR1205160 5dpf transgenic sqET20 and GFP+ 2.39879 SRR516121 skin male and 3.5 year 2.33597 SRR800043 sphere stage normal 2.08051 SRR516133 skin male and 5 month 2.03051 SRR1565811 brain normal 2.00794 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 1.9227 SRR1562532 spleen normal 1.81499 SRR516134 skin male and 5 month 1.7867099999999998 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 1.7466400000000002 ERR594416 retina transgenic flk1 1.69396 SRR516128 skin male and 5 month 1.65569 SRR516132 skin male and 5 month 1.6460400000000002 SRR516122 skin male and 3.5 year 1.59217 ERR023143 swim bladder normal 1.5839 SRR1562533 testis normal 1.48465 SRR1035237 liver transgenic UHRF1 1.3043799999999999 SRR1562528 eye normal 1.25587 SRR886457 512 cell 4-thio-UTP metabolic labeling 1.20631 SRR891511 brain normal 1.17175 SRR516125 skin male and 3.5 year 1.1326200000000002 SRR527834 head normal 1.11594 SRR1299124 caudal fin Zero day time after treatment 0.9921120000000001 SRR516126 skin male and 5 month 0.895476 ERR594417 retina normal 0.8789170000000001 SRR516135 skin male and 5 month 0.8134399999999999 SRR941749 anterior pectoral fin normal 0.806462 SRR1562531 muscle normal 0.804828 SRR1647680 head kidney SVCV treatment 0.685254 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 0.680941 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 0.647871 SRR592699 pineal gland normal 0.644142 SRR516129 skin male and 5 month 0.55971 SRR592703 pineal gland normal 0.524975 SRR941753 posterior pectoral fin normal 0.502167 SRR891512 blood normal 0.49129300000000004 SRR592698 pineal gland normal 0.477659 SRR891510 muscle normal 0.45688199999999995 SRR592700 pineal gland normal 0.42142799999999997 SRR592702 pineal gland normal 0.399667 SRR1048061 pineal gland dark 0.367938 SRR748488 sperm normal 0.367274 SRR1647681 head kidney SVCV treatment 0.344769 SRR1039573 gastrointestinal diet 0.75 NPM 0.328907 SRR1647679 head kidney normal 0.306667 SRR1562529 intestine and pancreas normal 0.300041 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 0.29499699999999995 SRR1039571 gastrointestinal diet 0.1 NPM 0.268462 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 0.252875 SRR1035239 liver transgenic mCherry control 0.228476 SRR800045 muscle normal 0.22747199999999998 SRR1647683 spleen SVCV treatment 0.225512 SRR1647682 spleen normal 0.22073600000000002 SRR886456 256 cell 4-thio-UTP metabolic labeling 0.204206 ERR023146 head kidney normal 0.200413 SRR1048059 pineal gland light 0.194991 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 0.17918 ERR023145 heart normal 0.160965 SRR592701 pineal gland normal 0.158251 SRR748489 egg normal 0.08381989999999999 SRR1647684 spleen SVCV treatment 0.0834154 SRR891495 heart normal 0.0704273 SRR527835 tail normal 0.0644082 SRR1648856 brain normal 0.0195858