sample tissue condition fpkm SRR886457 512 cell 4-thio-UTP metabolic labeling 155.328 SRR886456 256 cell 4-thio-UTP metabolic labeling 130.234 SRR886455 128 cell 4-thio-UTP metabolic labeling 127.802 SRR519717 2 dpf FETOH treatment 12.5801 SRR519737 2 dpf VD3 treatment 12.0893 SRR519752 7 dpf VD3 treatment 11.6641 SRR891511 brain normal 10.5109 SRR748489 egg normal 9.96529 SRR519747 6 dpf VD3 treatment 9.84885 SRR516121 skin male and 3.5 year 9.715539999999999 SRR516123 skin male and 3.5 year 9.59503 SRR594771 endothelium normal 9.594610000000001 ERR023143 swim bladder normal 9.377839999999999 SRR519742 4 dpf VD3 treatment 8.78303 SRR519727 6 dpf FETOH treatment 8.76554 SRR519732 7 dpf FETOH treatment 8.72339 SRR594769 blood normal 8.67271 SRR891495 heart normal 8.53482 SRR519722 4 dpf FETOH treatment 8.27732 SRR527834 head normal 8.052760000000001 SRR516122 skin male and 3.5 year 7.88841 SRR891510 muscle normal 7.69584 SRR527833 5 dpf normal 7.60878 SRR516124 skin male and 3.5 year 7.54298 SRR038624 embryo traf6 morpholino and bacterial infection 7.140969999999999 SRR658541 6 somite normal 7.07999 SRR527835 tail normal 7.02537 SRR516129 skin male and 5 month 6.98366 SRR658545 6 somite Gata6 morphant 6.63536 SRR658543 6 somite Gata5 morphan 6.51451 SRR038625 embryo traf6 morpholino 6.50164 SRR726542 5 dpf infection with control 6.30612 SRR516131 skin male and 5 month 6.186 SRR514028 retina control morpholino 6.14302 SRR535943 larvae vangl mut 5.78337 SRR658547 6 somite Gata5/6 morphant 5.7168 SRR516126 skin male and 5 month 5.65864 SRR038627 embryo control morpholino 5.61095 SRR658533 bud normal 5.37944 SRR527832 16-36 hpf normal 5.27292 SRR516133 skin male and 5 month 5.24179 SRR516132 skin male and 5 month 5.21736 SRR516125 skin male and 3.5 year 5.21517 SRR514030 retina id2a morpholino 5.15667 SRR535926 larvae normal 5.14257 ERR023146 head kidney normal 5.09685 SRR516134 skin male and 5 month 4.99169 SRR658537 bud Gata6 morphant 4.960319999999999 SRR038626 embryo control morpholino and bacterial infection 4.89111 SRR749514 24 hpf normal 4.7922 SRR516127 skin male and 5 month 4.70873 SRR658535 bud Gata5 morphant 4.70067 SRR700534 heart control morpholino 4.67552 SRR516130 skin male and 5 month 4.62171 SRR726540 5 dpf normal 4.57533 SRR633544 larvae exposed to cold stress 4.5514 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 4.511340000000001 SRR658539 bud Gata5/6 morphant 4.474530000000001 SRR516128 skin male and 5 month 4.43069 SRR1299125 caudal fin Half day time after treatment 4.3451699999999995 SRR749515 24 hpf eif3ha morphant 4.25013 SRR726541 5 dpf infection with Mycobacterium marinum 4.214519999999999 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 4.06776 SRR1299124 caudal fin Zero day time after treatment 3.98092 SRR527836 24hpf normal 3.9589300000000005 SRR1035978 13 hpf rx3-/- 3.9115300000000004 SRR1299128 caudal fin Three days time after treatment 3.90456 SRR1299129 caudal fin Seven days time after treatment 3.88256 SRR1035237 liver transgenic UHRF1 3.8420199999999998 SRR1004788 larvae impdh1b morpholino 3.8218300000000003 SRR1035239 liver transgenic mCherry control 3.81495 SRR1035981 13 hpf rx3+/+ or rx3+/- 3.75674 SRR891504 liver normal 3.74082 SRR516135 skin male and 5 month 3.69499 SRR941749 anterior pectoral fin normal 3.61734 SRR1299127 caudal fin Two days time after treatment 3.61026 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 3.6038300000000003 ERR023144 brain normal 3.55134 SRR527840 24hpf normal 3.4742900000000003 SRR1035984 13 hpf normal 3.4154400000000003 SRR891512 blood normal 3.41284 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 3.35526 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 3.35103 SRR633516 larvae normal 3.3246300000000004 SRR1562530 liver normal 3.29514 SRR700537 heart Gata4 morpholino 3.29399 SRR633550 larvae exposed to hypoxia stress 3.23326 SRR1167756 embryo mpeg1 morpholino 3.2331 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 3.19837 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 3.07377 SRR527844 24hpf normal 3.02674 SRR1167757 embryo mpeg1 morpholino and bacterial infection 3.00568 SRR1167763 embryo ptpn6 morpholino and bacterial infection 2.99047 SRR535890 larvae normal 2.98333 SRR941753 posterior pectoral fin normal 2.98204 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 2.97644 SRR776507 embryo normal 2.95234 SRR1647682 spleen normal 2.94964 ERR023145 heart normal 2.89425 SRR1562531 muscle normal 2.87898 SRR1167753 embryo bacterial infection 2.87448 SRR1167762 embryo ptpn6 morpholino 2.8675900000000003 SRR942764 embryo myd88-/- 2.85022 SRR776509 embryo Salmonella infected 2.84824 SRR1021215 sphere stage Mzeomesa 2.82625 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 2.80159 SRR1167752 embryo normal 2.76861 SRR776508 embryo miR-146 knockdown 2.75015 SRR1562528 eye normal 2.73603 SRR592699 pineal gland normal 2.72894 SRR1205154 5dpf transgenic sqET20 2.7242 SRR1299126 caudal fin One day time after treatment 2.7215599999999998 SRR776510 embryo Salmonella infected and miR-146 knockdown 2.7089 SRR1205160 5dpf transgenic sqET20 and GFP+ 2.70817 SRR630464 5 dpf injected epidermidis 2.70592 SRR797908 embryo normal 2.67448 SRR592703 pineal gland normal 2.66609 SRR630463 5 dpf normal 2.59287 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 2.58523 SRR592702 pineal gland normal 2.58378 SRR535986 larvae nhsl1b mut 2.5836200000000002 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 2.57329 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 2.54347 SRR1048059 pineal gland light 2.4986 SRR1569495 embryo normal 2.49096 SRR797914 embryo pbx2/4-MO 2.48773 SRR610740 3 dpf normal 2.46697 SRR797911 embryo prdm1-/- 2.46369 SRR1342218 embryo marco morpholino 2.45732 SRR610742 3 dpf express NICD 2.4540599999999997 SRR065196 3 dpf normal 2.4396299999999997 SRR065197 3 dpf U1C knockout 2.42887 SRR797917 embryo pbx2/4-MO and prdm1-/- 2.34158 SRR1291417 5 dpi injected marinum 2.30924 SRR942769 embryo myd88+/+ 2.26642 SRR535913 larvae krox mut 2.24784 SRR1562532 spleen normal 2.21126 SRR610741 3 dpf express Ras 2.21012 SRR1188152 embryo Insulin 0.5 hpi 2.21005 SRR1104058 heart normal 2.20802 SRR1291414 5 dpi normal 2.16709 SRR1342216 embryo norml 2.15755 SRR592700 pineal gland normal 2.15479 SRR1188148 embryo Control PBS 0.5 hpi 2.1435400000000002 SRR1523211 embryo control morpholino 2.12393 SRR1647684 spleen SVCV treatment 2.11517 SRR535978 larvae normal 2.07302 SRR1647683 spleen SVCV treatment 2.05133 SRR1188156 embryo Control PBS 4 hpi 2.0465 SRR1048061 pineal gland dark 2.0220700000000003 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 2.00627 SRR1104059 heart kctd10 mut 1.9654099999999999 SRR748488 sperm normal 1.9033799999999998 SRR1569491 embryo normal 1.8630000000000002 SRR1562533 testis normal 1.8520599999999998 ERR594417 retina normal 1.8442599999999998 SRR831692 embryo normal 1.83864 SRR592698 pineal gland normal 1.7910599999999999 SRR748490 1 kcell normal 1.73469 SRR1342217 embryo infection with Mycobacterium marinum 1.71632 SRR1004786 larvae control morpholino 1.7062599999999999 SRR1005529 embryo control morpholino 1.6909299999999998 SRR801554 embryo control morpholino 1.68838 SRR1005530 embryo RPL11 morpholino 1.6646 SRR1565815 brain normal 1.62616 SRR801555 embryo RPS19 morpholino 1.5995 SRR1188160 embryo Insulin 4 hpi 1.59721 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 1.59394 ERR594416 retina transgenic flk1 1.5677299999999998 SRR1523214 embryo glut12 morpholino 1.56574 SRR592701 pineal gland normal 1.49539 SRR1028002 head normal 1.4908700000000001 SRR1565809 brain normal 1.4551399999999999 SRR535848 larvae hoxb1b mut 1.43734 SRR1562529 intestine and pancreas normal 1.4296 SRR800046 sphere stage 5azaCyD treatment 1.42061 SRR535852 larvae hoxb1b mut 1.42058 SRR1565813 brain normal 1.41913 SRR1565811 brain normal 1.41353 SRR1004787 larvae impdh1a morpholino 1.38986 SRR1004785 larvae normal 1.38373 SRR1565819 brain normal 1.34247 SRR535849 larvae normal 1.33704 SRR535851 larvae normal 1.30988 SRR535850 larvae hoxb1b mut 1.2669 SRR1565807 brain normal 1.25568 SRR1565805 brain normal 1.2396399999999999 SRR801556 embryo RPS19 and p53 morpholino 1.2347299999999999 ERR594418 retina transgenic flk1 and develop tumors 1.20173 SRR1647680 head kidney SVCV treatment 1.12445 SRR1708345 embryo SIBAS 1.08541 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 1.08524 SRR748491 germ ring normal 1.07407 SRR1647681 head kidney SVCV treatment 1.0704799999999999 SRR1028003 head normal 1.05748 SRR800049 sphere stage control treatment 1.04487 SRR535847 larvae normal 1.04298 SRR1647679 head kidney normal 1.02272 SRR1004789 larvae impdh2 morpholino 1.0076399999999999 SRR800043 sphere stage normal 0.9645819999999999 SRR1565817 brain normal 0.962399 SRR1534349 larvae DMSO vehicle 0.94955 SRR1039573 gastrointestinal diet 0.75 NPM 0.907336 SRR1028004 head normal 0.8676219999999999 SRR1021213 sphere stage normal 0.8556239999999999 SRR1708346 embryo SIBPS 0.787205 SRR1039571 gastrointestinal diet 0.1 NPM 0.773479 SRR1534350 larvae 5 ug/l BDE47 treatment 0.734428 SRR800045 muscle normal 0.732448 SRR1534351 larvae 500 ug/l BDE47 treatment 0.728661 SRR1708344 embryo MUTPS 0.6941890000000001 SRR1708343 embryo MUTAS 0.66867 SRR800037 egg normal 0.6335970000000001 SRR957181 heart normal 0.044608999999999996 SRR1648856 brain normal 0.0384821 SRR1648854 brain normal 0.025356999999999998 SRR372802 5 dpf normal 0.0250553 SRR372796 bud normal 0.0246507 SRR372793 shield normal 0.024600200000000003 SRR372800 2 dpf normal 0.021461599999999997 SRR372791 dome normal 0.00396838 SRR1621206 embryo normal 0.00216308