sample tissue condition fpkm SRR514030 retina id2a morpholino 133.708 SRR514028 retina control morpholino 122.684 SRR594769 blood normal 110.811 SRR372796 bud normal 102.47 SRR658541 6 somite normal 86.2058 SRR527840 24hpf normal 86.1433 SRR527836 24hpf normal 83.8392 SRR527844 24hpf normal 82.21799999999999 SRR658533 bud normal 80.8903 SRR658545 6 somite Gata6 morphant 78.6542 SRR658543 6 somite Gata5 morphan 75.9239 SRR749515 24 hpf eif3ha morphant 73.7305 SRR658547 6 somite Gata5/6 morphant 73.4452 SRR594771 endothelium normal 72.3916 SRR700534 heart control morpholino 71.9199 SRR1569491 embryo normal 71.6395 SRR658535 bud Gata5 morphant 71.195 SRR749514 24 hpf normal 70.8053 SRR1035981 13 hpf rx3+/+ or rx3+/- 70.1031 SRR1035978 13 hpf rx3-/- 68.6894 SRR700537 heart Gata4 morpholino 68.1683 SRR776508 embryo miR-146 knockdown 66.0542 SRR776510 embryo Salmonella infected and miR-146 knockdown 62.8451 SRR797911 embryo prdm1-/- 62.3005 SRR776507 embryo normal 61.1438 SRR797908 embryo normal 60.4971 SRR658539 bud Gata5/6 morphant 59.3431 SRR1569495 embryo normal 57.6583 SRR372798 28 hpf normal 57.1827 SRR658537 bud Gata6 morphant 57.0436 SRR372793 shield normal 55.9092 SRR535978 larvae normal 52.6836 SRR372800 2 dpf normal 52.2075 SRR527832 16-36 hpf normal 52.0862 SRR1708345 embryo SIBAS 51.7382 SRR1648856 brain normal 51.7127 SRR797914 embryo pbx2/4-MO 51.5561 SRR776509 embryo Salmonella infected 50.2549 SRR797917 embryo pbx2/4-MO and prdm1-/- 50.1499 SRR535943 larvae vangl mut 49.9034 SRR1299127 caudal fin Two days time after treatment 49.2414 SRR1708346 embryo SIBPS 48.7087 SRR535986 larvae nhsl1b mut 48.4437 SRR535926 larvae normal 47.0654 SRR1035984 13 hpf normal 45.7911 SRR038627 embryo control morpholino 45.7478 SRR1708343 embryo MUTAS 44.3865 SRR1708344 embryo MUTPS 43.8582 SRR038625 embryo traf6 morpholino 43.6275 SRR1104058 heart normal 43.5224 SRR1005529 embryo control morpholino 43.3062 SRR1104059 heart kctd10 mut 43.2729 SRR801554 embryo control morpholino 43.2411 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 41.604 SRR038626 embryo control morpholino and bacterial infection 41.5785 SRR535890 larvae normal 41.2532 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 40.8387 SRR038624 embryo traf6 morpholino and bacterial infection 40.2927 SRR535913 larvae krox mut 39.3083 SRR1004786 larvae control morpholino 39.25 SRR1299128 caudal fin Three days time after treatment 38.7853 SRR1299129 caudal fin Seven days time after treatment 38.7052 SRR1004785 larvae normal 38.6633 SRR1299125 caudal fin Half day time after treatment 38.0831 SRR1648854 brain normal 37.4592 SRR1004788 larvae impdh1b morpholino 37.3241 SRR065197 3 dpf U1C knockout 37.0306 SRR065196 3 dpf normal 35.67 SRR1299126 caudal fin One day time after treatment 35.2544 SRR1004787 larvae impdh1a morpholino 34.6511 SRR801555 embryo RPS19 morpholino 33.8641 SRR1004789 larvae impdh2 morpholino 33.8348 SRR1005530 embryo RPL11 morpholino 33.485 SRR519737 2 dpf VD3 treatment 33.3501 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 33.3227 SRR519717 2 dpf FETOH treatment 31.4661 SRR630464 5 dpf injected epidermidis 31.1834 SRR1167752 embryo normal 31.1085 SRR801556 embryo RPS19 and p53 morpholino 30.9283 SRR1167763 embryo ptpn6 morpholino and bacterial infection 30.0041 SRR1291417 5 dpi injected marinum 29.8466 SRR1523211 embryo control morpholino 29.8102 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 29.6537 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 29.506 SRR630463 5 dpf normal 28.9371 SRR1291414 5 dpi normal 28.8849 SRR942769 embryo myd88+/+ 28.831 SRR527833 5 dpf normal 28.7102 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 28.6668 SRR1205154 5dpf transgenic sqET20 28.5823 SRR372791 dome normal 28.3083 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 28.0581 SRR1167753 embryo bacterial infection 27.9731 SRR1342218 embryo marco morpholino 27.6279 SRR1648855 brain normal 27.2321 SRR1167756 embryo mpeg1 morpholino 26.8949 SRR516133 skin male and 5 month 26.5309 SRR516131 skin male and 5 month 26.4505 SRR942764 embryo myd88-/- 26.4344 SRR1167762 embryo ptpn6 morpholino 26.3886 SRR1342217 embryo infection with Mycobacterium marinum 26.1791 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 25.5257 SRR1523214 embryo glut12 morpholino 25.5159 SRR1299124 caudal fin Zero day time after treatment 25.4467 SRR1342216 embryo norml 25.2199 SRR831692 embryo normal 24.6391 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 24.5875 SRR1035237 liver transgenic UHRF1 23.9779 ERR023146 head kidney normal 23.9373 SRR1167757 embryo mpeg1 morpholino and bacterial infection 23.8675 SRR1188152 embryo Insulin 0.5 hpi 23.4406 SRR516134 skin male and 5 month 22.6953 SRR610740 3 dpf normal 22.5743 SRR610741 3 dpf express Ras 22.2492 SRR1188148 embryo Control PBS 0.5 hpi 22.2047 ERR594417 retina normal 22.1954 SRR516127 skin male and 5 month 21.6694 SRR1205160 5dpf transgenic sqET20 and GFP+ 21.3103 SRR1188160 embryo Insulin 4 hpi 21.2828 SRR516126 skin male and 5 month 21.2191 SRR516124 skin male and 3.5 year 21.1717 SRR748491 germ ring normal 21.0533 SRR516125 skin male and 3.5 year 20.9761 SRR610742 3 dpf express NICD 20.5175 SRR1562528 eye normal 20.4922 ERR594418 retina transgenic flk1 and develop tumors 20.2424 SRR516121 skin male and 3.5 year 20.1381 ERR594416 retina transgenic flk1 19.9264 SRR516123 skin male and 3.5 year 19.7002 SRR372802 5 dpf normal 19.3536 SRR726540 5 dpf normal 18.8871 SRR633550 larvae exposed to hypoxia stress 18.44 ERR023145 heart normal 18.1324 SRR535848 larvae hoxb1b mut 18.0593 SRR726541 5 dpf infection with Mycobacterium marinum 17.9369 SRR519742 4 dpf VD3 treatment 17.6899 SRR516130 skin male and 5 month 17.2824 SRR1021215 sphere stage Mzeomesa 17.0031 SRR527834 head normal 16.886 SRR633516 larvae normal 16.7763 SRR516122 skin male and 3.5 year 16.6824 SRR1562533 testis normal 16.6411 SRR1188156 embryo Control PBS 4 hpi 16.5234 SRR535851 larvae normal 16.5162 SRR519722 4 dpf FETOH treatment 16.4315 SRR726542 5 dpf infection with control 16.3796 SRR516128 skin male and 5 month 16.2474 SRR516129 skin male and 5 month 16.0854 SRR535850 larvae hoxb1b mut 15.8787 SRR535849 larvae normal 15.6446 SRR535852 larvae hoxb1b mut 15.4919 SRR1647680 head kidney SVCV treatment 15.4837 SRR535847 larvae normal 15.2794 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 15.2558 ERR023143 swim bladder normal 15.2111 SRR1647684 spleen SVCV treatment 14.8245 SRR1647683 spleen SVCV treatment 14.725999999999999 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 14.6438 SRR592699 pineal gland normal 14.5073 SRR592702 pineal gland normal 14.4824 SRR519752 7 dpf VD3 treatment 14.3306 SRR516135 skin male and 5 month 14.1804 SRR592698 pineal gland normal 14.0685 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 14.0377 SRR1562532 spleen normal 14.0369 SRR519747 6 dpf VD3 treatment 13.8359 SRR1028004 head normal 13.7596 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 13.677 SRR1647682 spleen normal 13.4741 SRR1562529 intestine and pancreas normal 13.4418 SRR633544 larvae exposed to cold stress 13.3447 SRR1028002 head normal 12.6719 SRR957180 heart 7 days after heart tip amputation 12.6276 SRR592703 pineal gland normal 12.6047 SRR1021213 sphere stage normal 12.3558 SRR748489 egg normal 12.2566 SRR592700 pineal gland normal 12.1969 SRR516132 skin male and 5 month 12.1889 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 12.1856 SRR1647679 head kidney normal 12.0555 SRR1562530 liver normal 12.0125 SRR891495 heart normal 11.7926 SRR891512 blood normal 11.7913 SRR519727 6 dpf FETOH treatment 11.7791 SRR800046 sphere stage 5azaCyD treatment 11.6289 SRR1647681 head kidney SVCV treatment 11.4557 SRR1028003 head normal 11.4526 SRR941749 anterior pectoral fin normal 11.3227 SRR957181 heart normal 11.253 SRR1562531 muscle normal 11.172 SRR1035239 liver transgenic mCherry control 10.8291 SRR1039573 gastrointestinal diet 0.75 NPM 10.6751 SRR1565811 brain normal 10.6181 SRR519732 7 dpf FETOH treatment 10.6011 SRR1565813 brain normal 10.5942 SRR592701 pineal gland normal 10.5569 SRR891511 brain normal 10.4883 SRR1039571 gastrointestinal diet 0.1 NPM 10.4284 SRR1565809 brain normal 10.4081 ERR023144 brain normal 10.3956 SRR1565805 brain normal 10.2355 SRR1534351 larvae 500 ug/l BDE47 treatment 10.1125 SRR941753 posterior pectoral fin normal 10.0057 SRR1565807 brain normal 9.94433 SRR372787 2-4 cell normal 9.80315 SRR1565815 brain normal 9.6633 SRR1565819 brain normal 9.54951 SRR891510 muscle normal 9.51732 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 9.30717 SRR1534350 larvae 5 ug/l BDE47 treatment 9.292760000000001 SRR891504 liver normal 9.26125 SRR1565817 brain normal 9.11703 SRR1048061 pineal gland dark 9.08539 SRR1534349 larvae DMSO vehicle 8.741710000000001 SRR527835 tail normal 8.58056 SRR1048059 pineal gland light 8.496780000000001 SRR800045 muscle normal 8.19697 SRR748488 sperm normal 5.645569999999999 SRR372789 1K cell normal 4.5544400000000005 SRR800049 sphere stage control treatment 4.46211 SRR800037 egg normal 3.9907199999999996 SRR1621206 embryo normal 3.9443900000000003 SRR800043 sphere stage normal 3.91985 SRR1049814 256 cell normal 3.9174599999999997 SRR886457 512 cell 4-thio-UTP metabolic labeling 3.64984 SRR886456 256 cell 4-thio-UTP metabolic labeling 3.18476 SRR886455 128 cell 4-thio-UTP metabolic labeling 3.1484 SRR748490 1 kcell normal 2.74705