sample tissue condition fpkm SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 31.2824 SRR1205160 5dpf transgenic sqET20 and GFP+ 16.9159 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 16.8938 ERR023143 swim bladder normal 16.3232 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 15.4214 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 5.95352 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 5.88662 SRR1299128 caudal fin Three days time after treatment 5.5649 SRR1299127 caudal fin Two days time after treatment 4.7486 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 4.6056 SRR1299129 caudal fin Seven days time after treatment 4.46694 SRR800045 muscle normal 4.33325 SRR1523214 embryo glut12 morpholino 4.3048 SRR1167753 embryo bacterial infection 4.29047 SRR1167762 embryo ptpn6 morpholino 4.27214 SRR1523211 embryo control morpholino 4.20439 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 4.13687 SRR1342218 embryo marco morpholino 4.105230000000001 SRR1167752 embryo normal 4.0052 SRR941749 anterior pectoral fin normal 3.91689 SRR942769 embryo myd88+/+ 3.9065300000000005 SRR372802 5 dpf normal 3.8816900000000003 SRR1167757 embryo mpeg1 morpholino and bacterial infection 3.85954 SRR519747 6 dpf VD3 treatment 3.82651 SRR1167763 embryo ptpn6 morpholino and bacterial infection 3.8060099999999997 SRR630464 5 dpf injected epidermidis 3.7979199999999995 SRR630463 5 dpf normal 3.76209 SRR1167756 embryo mpeg1 morpholino 3.60569 SRR1291414 5 dpi normal 3.5571800000000002 SRR1342217 embryo infection with Mycobacterium marinum 3.42708 SRR610740 3 dpf normal 3.4236699999999995 SRR1188160 embryo Insulin 4 hpi 3.3445699999999996 SRR1188148 embryo Control PBS 0.5 hpi 3.34329 SRR519752 7 dpf VD3 treatment 3.32953 SRR1188152 embryo Insulin 0.5 hpi 3.30821 SRR1342216 embryo norml 3.30104 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 3.18423 SRR610742 3 dpf express NICD 3.1452299999999997 SRR1205154 5dpf transgenic sqET20 3.1042 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 3.097 SRR535851 larvae normal 3.06513 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 3.0360400000000003 SRR942764 embryo myd88-/- 3.016 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 2.95063 SRR1028002 head normal 2.93954 SRR519742 4 dpf VD3 treatment 2.93391 SRR831692 embryo normal 2.92437 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 2.9073700000000002 SRR941753 posterior pectoral fin normal 2.89989 SRR519732 7 dpf FETOH treatment 2.88155 SRR519727 6 dpf FETOH treatment 2.86006 SRR516126 skin male and 5 month 2.85685 SRR1708346 embryo SIBPS 2.8299 SRR1188156 embryo Control PBS 4 hpi 2.82016 SRR519722 4 dpf FETOH treatment 2.7873799999999997 SRR1291417 5 dpi injected marinum 2.7442900000000003 SRR610741 3 dpf express Ras 2.70535 SRR1028004 head normal 2.68942 SRR535850 larvae hoxb1b mut 2.68696 SRR1708344 embryo MUTPS 2.59427 SRR516127 skin male and 5 month 2.59115 SRR535852 larvae hoxb1b mut 2.5815200000000003 SRR1028003 head normal 2.5714200000000003 SRR726540 5 dpf normal 2.53409 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 2.49618 SRR891510 muscle normal 2.43792 SRR1534351 larvae 500 ug/l BDE47 treatment 2.40687 SRR065197 3 dpf U1C knockout 2.38294 ERR594416 retina transgenic flk1 2.36911 SRR527833 5 dpf normal 2.36145 SRR1708345 embryo SIBAS 2.35311 SRR535847 larvae normal 2.32083 SRR372800 2 dpf normal 2.3196 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 2.31396 SRR516128 skin male and 5 month 2.29509 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 2.24918 SRR535848 larvae hoxb1b mut 2.22214 SRR535849 larvae normal 2.18197 ERR023146 head kidney normal 2.15984 SRR749515 24 hpf eif3ha morphant 2.1152599999999997 SRR1708343 embryo MUTAS 2.06365 SRR594771 endothelium normal 2.04581 SRR633550 larvae exposed to hypoxia stress 2.04228 SRR535986 larvae nhsl1b mut 2.0380700000000003 SRR1534349 larvae DMSO vehicle 2.00576 SRR065196 3 dpf normal 1.9957 SRR527834 head normal 1.99518 SRR1562528 eye normal 1.95711 SRR1562533 testis normal 1.94642 SRR516122 skin male and 3.5 year 1.9351599999999998 SRR776507 embryo normal 1.90516 ERR594417 retina normal 1.8945400000000001 SRR726541 5 dpf infection with Mycobacterium marinum 1.88061 SRR372798 28 hpf normal 1.8595 SRR1534350 larvae 5 ug/l BDE47 treatment 1.8480599999999998 SRR1648854 brain normal 1.84353 SRR519717 2 dpf FETOH treatment 1.8252700000000002 SRR519737 2 dpf VD3 treatment 1.81772 SRR527836 24hpf normal 1.81718 SRR1299124 caudal fin Zero day time after treatment 1.80203 SRR527840 24hpf normal 1.78886 SRR633516 larvae normal 1.7733 SRR535978 larvae normal 1.73395 SRR1562531 muscle normal 1.68395 SRR776508 embryo miR-146 knockdown 1.65271 SRR726542 5 dpf infection with control 1.61076 SRR776510 embryo Salmonella infected and miR-146 knockdown 1.57996 ERR023145 heart normal 1.56647 SRR1648856 brain normal 1.48995 SRR527844 24hpf normal 1.46167 SRR633544 larvae exposed to cold stress 1.44628 SRR1005529 embryo control morpholino 1.44089 SRR801554 embryo control morpholino 1.43874 SRR749514 24 hpf normal 1.4225700000000001 SRR1648855 brain normal 1.3888200000000002 SRR592701 pineal gland normal 1.3346200000000001 SRR516125 skin male and 3.5 year 1.32992 ERR594418 retina transgenic flk1 and develop tumors 1.32715 SRR801556 embryo RPS19 and p53 morpholino 1.2964 SRR516135 skin male and 5 month 1.27791 SRR700537 heart Gata4 morpholino 1.27359 SRR1569491 embryo normal 1.26501 SRR516130 skin male and 5 month 1.2482 SRR516123 skin male and 3.5 year 1.24721 SRR776509 embryo Salmonella infected 1.19506 SRR516133 skin male and 5 month 1.1688100000000001 SRR516129 skin male and 5 month 1.16582 SRR038627 embryo control morpholino 1.13477 SRR1004788 larvae impdh1b morpholino 1.10585 SRR516134 skin male and 5 month 1.10405 SRR038625 embryo traf6 morpholino 1.08449 SRR514028 retina control morpholino 1.08396 SRR535913 larvae krox mut 1.0817299999999999 SRR1004786 larvae control morpholino 1.0454 SRR1104058 heart normal 1.0145899999999999 SRR516131 skin male and 5 month 1.00662 SRR1569495 embryo normal 0.976358 SRR797908 embryo normal 0.956299 SRR535890 larvae normal 0.952485 SRR1104059 heart kctd10 mut 0.9359280000000001 SRR1299126 caudal fin One day time after treatment 0.910394 SRR527832 16-36 hpf normal 0.87477 SRR535943 larvae vangl mut 0.870017 SRR514030 retina id2a morpholino 0.866985 SRR1299125 caudal fin Half day time after treatment 0.8601120000000001 SRR535926 larvae normal 0.859274 SRR797911 embryo prdm1-/- 0.809404 SRR516124 skin male and 3.5 year 0.807466 SRR797914 embryo pbx2/4-MO 0.792845 SRR1004787 larvae impdh1a morpholino 0.742326 SRR658541 6 somite normal 0.7370260000000001 SRR797917 embryo pbx2/4-MO and prdm1-/- 0.72031 SRR594769 blood normal 0.7154560000000001 SRR658545 6 somite Gata6 morphant 0.710282 SRR1005530 embryo RPL11 morpholino 0.709058 SRR801555 embryo RPS19 morpholino 0.705176 SRR1004785 larvae normal 0.6822520000000001 SRR516121 skin male and 3.5 year 0.6729109999999999 SRR1562530 liver normal 0.647468 ERR023144 brain normal 0.634555 SRR038626 embryo control morpholino and bacterial infection 0.6307619999999999 SRR658547 6 somite Gata5/6 morphant 0.621197 SRR038624 embryo traf6 morpholino and bacterial infection 0.604121 SRR700534 heart control morpholino 0.598564 SRR1035981 13 hpf rx3+/+ or rx3+/- 0.5932029999999999 SRR658543 6 somite Gata5 morphan 0.578078 SRR592703 pineal gland normal 0.48261400000000004 SRR1562532 spleen normal 0.479808 SRR516132 skin male and 5 month 0.46469099999999997 SRR1004789 larvae impdh2 morpholino 0.464437 SRR1035978 13 hpf rx3-/- 0.448384 SRR1039571 gastrointestinal diet 0.1 NPM 0.399938 SRR1565817 brain normal 0.357095 SRR891511 brain normal 0.34389699999999995 SRR658535 bud Gata5 morphant 0.31501399999999996 SRR1565811 brain normal 0.314658 SRR658533 bud normal 0.312598 SRR1565807 brain normal 0.310977 SRR1565809 brain normal 0.309021 SRR592702 pineal gland normal 0.297108 SRR1565819 brain normal 0.295063 SRR372796 bud normal 0.29467600000000005 SRR1647679 head kidney normal 0.281529 SRR1565815 brain normal 0.275421 SRR1035984 13 hpf normal 0.27460100000000004 SRR658539 bud Gata5/6 morphant 0.272308 SRR658537 bud Gata6 morphant 0.267063 SRR1565805 brain normal 0.26301399999999997 SRR1565813 brain normal 0.24894499999999997 SRR1562529 intestine and pancreas normal 0.239769 SRR592700 pineal gland normal 0.22809000000000001 SRR1647680 head kidney SVCV treatment 0.203073 SRR1048059 pineal gland light 0.185522 SRR1035239 liver transgenic mCherry control 0.18090799999999999 SRR1647681 head kidney SVCV treatment 0.17923699999999998 SRR1039573 gastrointestinal diet 0.75 NPM 0.175323 SRR527835 tail normal 0.156569 SRR592698 pineal gland normal 0.126996 SRR748488 sperm normal 0.10585699999999999 SRR592699 pineal gland normal 0.09877810000000001 SRR372793 shield normal 0.0932045 SRR891512 blood normal 0.0931429 SRR1048061 pineal gland dark 0.09156289999999999 SRR891504 liver normal 0.0718208 SRR1647683 spleen SVCV treatment 0.0681609 SRR957180 heart 7 days after heart tip amputation 0.0668044 SRR1647682 spleen normal 0.0606898 SRR1035237 liver transgenic UHRF1 0.0584201 SRR748491 germ ring normal 0.0471009 SRR957181 heart normal 0.044668400000000004 SRR1647684 spleen SVCV treatment 0.0409306 SRR372791 dome normal 0.0303437 SRR800043 sphere stage normal 0.0274183 SRR800037 egg normal 0.0214785 SRR748490 1 kcell normal 0.021388400000000002 SRR372789 1K cell normal 0.016066399999999998 SRR1021213 sphere stage normal 0.0115934 SRR1049814 256 cell normal 0.00724788 SRR1021215 sphere stage Mzeomesa 0.00561246 SRR1621206 embryo normal 0.00260652 SRR886457 512 cell 4-thio-UTP metabolic labeling 1.1153600000000001e-06 SRR886455 128 cell 4-thio-UTP metabolic labeling 1.09718e-06 SRR891495 heart normal 9.361069999999999e-07