sample tissue condition fpkm SRR1004785 larvae normal 29517.1 SRR1562530 liver normal 27790.0 SRR1004787 larvae impdh1a morpholino 27222.8 SRR372802 5 dpf normal 26222.9 SRR801555 embryo RPS19 morpholino 21253.7 SRR1005530 embryo RPL11 morpholino 20089.9 SRR1569491 embryo normal 18636.8 SRR1004786 larvae control morpholino 18177.4 SRR1035239 liver transgenic mCherry control 18061.6 SRR801556 embryo RPS19 and p53 morpholino 16553.6 SRR891504 liver normal 15675.2 SRR891512 blood normal 15437.0 SRR1039573 gastrointestinal diet 0.75 NPM 15356.9 SRR1004788 larvae impdh1b morpholino 15149.8 SRR372798 28 hpf normal 14783.9 SRR1005529 embryo control morpholino 14320.3 SRR801554 embryo control morpholino 14298.8 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 14239.0 SRR372800 2 dpf normal 13411.3 SRR1004789 larvae impdh2 morpholino 12983.1 SRR1039571 gastrointestinal diet 0.1 NPM 12594.5 SRR527844 24hpf normal 12097.0 SRR1299126 caudal fin One day time after treatment 11988.6 SRR1299125 caudal fin Half day time after treatment 11836.4 SRR941753 posterior pectoral fin normal 11742.9 SRR1534350 larvae 5 ug/l BDE47 treatment 11534.5 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 11139.2 SRR1534349 larvae DMSO vehicle 11049.5 SRR1534351 larvae 500 ug/l BDE47 treatment 10541.9 SRR1035237 liver transgenic UHRF1 10407.3 SRR1299124 caudal fin Zero day time after treatment 10382.6 SRR941749 anterior pectoral fin normal 10334.1 SRR1562529 intestine and pancreas normal 10041.2 SRR748488 sperm normal 9781.2 SRR891495 heart normal 9629.34 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 9603.74 SRR891510 muscle normal 9482.67 SRR1205160 5dpf transgenic sqET20 and GFP+ 9477.73 SRR535978 larvae normal 9465.01 SRR1569495 embryo normal 9354.02 SRR1299127 caudal fin Two days time after treatment 9353.09 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 9329.35 SRR1299129 caudal fin Seven days time after treatment 9179.62 SRR527836 24hpf normal 8646.41 SRR372796 bud normal 8521.99 SRR594769 blood normal 8490.68 SRR1648856 brain normal 8283.76 SRR1708346 embryo SIBPS 8266.54 SRR1299128 caudal fin Three days time after treatment 8231.38 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 7922.03 SRR038625 embryo traf6 morpholino 7873.21 SRR372793 shield normal 7744.4 SRR1708344 embryo MUTPS 7648.85 SRR527840 24hpf normal 7641.27 SRR535986 larvae nhsl1b mut 7620.8 SRR519732 7 dpf FETOH treatment 7424.28 SRR700534 heart control morpholino 7375.18 SRR594771 endothelium normal 7373.72 SRR065197 3 dpf U1C knockout 7293.56 SRR519727 6 dpf FETOH treatment 7160.18 SRR038624 embryo traf6 morpholino and bacterial infection 7097.51 SRR1562531 muscle normal 7090.42 SRR1647680 head kidney SVCV treatment 7006.86 SRR038627 embryo control morpholino 7001.83 SRR1035981 13 hpf rx3+/+ or rx3+/- 6937.59 SRR1291417 5 dpi injected marinum 6922.45 SRR519752 7 dpf VD3 treatment 6829.34 SRR630464 5 dpf injected epidermidis 6809.2 SRR1291414 5 dpi normal 6799.0 SRR038626 embryo control morpholino and bacterial infection 6750.73 SRR630463 5 dpf normal 6687.66 SRR519737 2 dpf VD3 treatment 6671.71 SRR1205154 5dpf transgenic sqET20 6546.06 SRR1035978 13 hpf rx3-/- 6493.65 SRR1035984 13 hpf normal 6480.56 SRR797908 embryo normal 6473.65 SRR658537 bud Gata6 morphant 6418.95 SRR1562532 spleen normal 6345.53 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 6303.62 SRR1647679 head kidney normal 6272.97 SRR700537 heart Gata4 morpholino 6261.86 SRR797911 embryo prdm1-/- 6223.94 SRR1708343 embryo MUTAS 6174.86 SRR1647681 head kidney SVCV treatment 6169.58 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 6118.01 SRR065196 3 dpf normal 6090.94 SRR519717 2 dpf FETOH treatment 6076.18 SRR535943 larvae vangl mut 6075.37 SRR749514 24 hpf normal 5939.99 SRR797914 embryo pbx2/4-MO 5840.67 SRR519747 6 dpf VD3 treatment 5815.34 SRR535926 larvae normal 5802.86 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 5778.48 SRR797917 embryo pbx2/4-MO and prdm1-/- 5743.8 SRR1167753 embryo bacterial infection 5722.83 SRR1167752 embryo normal 5693.72 SRR1647683 spleen SVCV treatment 5572.75 SRR1028002 head normal 5552.46 SRR1342218 embryo marco morpholino 5478.55 SRR776507 embryo normal 5471.75 SRR658541 6 somite normal 5467.27 SRR1188160 embryo Insulin 4 hpi 5451.12 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 5448.79 SRR527832 16-36 hpf normal 5420.52 SRR1708345 embryo SIBAS 5404.13 SRR749515 24 hpf eif3ha morphant 5398.67 SRR658547 6 somite Gata5/6 morphant 5198.48 SRR535913 larvae krox mut 5173.8 SRR726542 5 dpf infection with control 5157.18 SRR519742 4 dpf VD3 treatment 5144.67 SRR1188152 embryo Insulin 0.5 hpi 5132.71 SRR658545 6 somite Gata6 morphant 5109.41 SRR633550 larvae exposed to hypoxia stress 5073.33 SRR1342216 embryo norml 5067.98 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 4976.18 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 4960.83 SRR776508 embryo miR-146 knockdown 4930.72 SRR1188148 embryo Control PBS 0.5 hpi 4891.31 SRR535890 larvae normal 4888.26 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 4862.65 SRR1167757 embryo mpeg1 morpholino and bacterial infection 4842.11 SRR1342217 embryo infection with Mycobacterium marinum 4789.09 SRR633516 larvae normal 4786.43 SRR658539 bud Gata5/6 morphant 4778.91 SRR658533 bud normal 4735.81 SRR519722 4 dpf FETOH treatment 4627.94 ERR594418 retina transgenic flk1 and develop tumors 4564.82 SRR1167756 embryo mpeg1 morpholino 4557.98 SRR942769 embryo myd88+/+ 4553.47 SRR726541 5 dpf infection with Mycobacterium marinum 4527.58 SRR1167762 embryo ptpn6 morpholino 4390.34 SRR776509 embryo Salmonella infected 4380.47 SRR1167763 embryo ptpn6 morpholino and bacterial infection 4379.92 SRR1523211 embryo control morpholino 4371.56 SRR726540 5 dpf normal 4370.29 SRR514030 retina id2a morpholino 4370.03 SRR942764 embryo myd88-/- 4365.45 SRR658543 6 somite Gata5 morphan 4311.18 SRR1647682 spleen normal 4275.12 SRR1647684 spleen SVCV treatment 4212.67 SRR514028 retina control morpholino 4153.54 SRR776510 embryo Salmonella infected and miR-146 knockdown 4136.95 SRR1648854 brain normal 4127.69 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 4088.98 SRR658535 bud Gata5 morphant 4085.67 SRR633544 larvae exposed to cold stress 4076.29 SRR610741 3 dpf express Ras 4043.07 SRR1028003 head normal 3883.73 SRR527834 head normal 3876.22 SRR610740 3 dpf normal 3742.18 SRR1188156 embryo Control PBS 4 hpi 3734.06 SRR1028004 head normal 3720.74 SRR516128 skin male and 5 month 3685.42 SRR1523214 embryo glut12 morpholino 3601.49 SRR527833 5 dpf normal 3498.52 SRR516125 skin male and 3.5 year 3401.23 SRR800045 muscle normal 3309.78 SRR610742 3 dpf express NICD 3261.82 SRR748489 egg normal 3235.15 SRR1104058 heart normal 3073.06 SRR535849 larvae normal 2995.84 SRR535852 larvae hoxb1b mut 2942.38 SRR516130 skin male and 5 month 2927.99 SRR516127 skin male and 5 month 2910.16 SRR516131 skin male and 5 month 2841.52 SRR535848 larvae hoxb1b mut 2805.05 SRR535851 larvae normal 2785.14 SRR535850 larvae hoxb1b mut 2753.39 SRR831692 embryo normal 2728.41 SRR535847 larvae normal 2681.75 SRR516122 skin male and 3.5 year 2651.98 SRR516132 skin male and 5 month 2635.25 SRR1104059 heart kctd10 mut 2599.32 SRR1562533 testis normal 2570.62 SRR516121 skin male and 3.5 year 2522.49 SRR1565813 brain normal 2499.42 SRR1648855 brain normal 2480.29 SRR516124 skin male and 3.5 year 2441.25 SRR372787 2-4 cell normal 2430.86 SRR516123 skin male and 3.5 year 2361.32 SRR372791 dome normal 2200.47 SRR516129 skin male and 5 month 2138.21 SRR1562528 eye normal 2129.42 SRR516133 skin male and 5 month 2086.42 SRR1565815 brain normal 1933.94 SRR592698 pineal gland normal 1903.04 SRR1048061 pineal gland dark 1897.23 SRR516126 skin male and 5 month 1791.85 SRR1565819 brain normal 1756.33 SRR516135 skin male and 5 month 1722.27 SRR1565817 brain normal 1707.65 SRR748491 germ ring normal 1697.55 ERR023145 heart normal 1683.72 ERR594416 retina transgenic flk1 1644.31 SRR1565807 brain normal 1620.97 SRR527835 tail normal 1618.06 SRR1048059 pineal gland light 1612.79 SRR957181 heart normal 1515.31 SRR516134 skin male and 5 month 1505.36 SRR1565805 brain normal 1459.33 SRR1565809 brain normal 1450.31 SRR592699 pineal gland normal 1325.84 ERR023146 head kidney normal 1290.58 SRR1565811 brain normal 1242.83 SRR957180 heart 7 days after heart tip amputation 1213.1 SRR592700 pineal gland normal 1205.31 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 1163.01 SRR748490 1 kcell normal 1122.14 SRR1049814 256 cell normal 1108.03 SRR1621206 embryo normal 975.638 SRR1021213 sphere stage normal 944.385 SRR592701 pineal gland normal 938.659 SRR891511 brain normal 878.959 SRR1021215 sphere stage Mzeomesa 869.8489999999999 SRR592702 pineal gland normal 842.816 ERR023143 swim bladder normal 817.63 ERR594417 retina normal 812.6569999999999 SRR372789 1K cell normal 603.1080000000001 SRR592703 pineal gland normal 577.355 SRR800046 sphere stage 5azaCyD treatment 514.547 SRR800043 sphere stage normal 489.329 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 478.649 SRR800049 sphere stage control treatment 273.786 SRR800037 egg normal 234.08 ERR023144 brain normal 192.40099999999998 SRR886457 512 cell 4-thio-UTP metabolic labeling 47.24100000000001 SRR886456 256 cell 4-thio-UTP metabolic labeling 41.9435 SRR886455 128 cell 4-thio-UTP metabolic labeling 40.1786