sample tissue condition fpkm SRR1035981 13 hpf rx3+/+ or rx3+/- 50.2766 SRR514030 retina id2a morpholino 47.8642 SRR1035978 13 hpf rx3-/- 41.7183 SRR514028 retina control morpholino 33.4568 SRR800037 egg normal 33.0223 SRR1104059 heart kctd10 mut 31.5002 SRR1004789 larvae impdh2 morpholino 30.1631 SRR1035984 13 hpf normal 26.8194 SRR1562533 testis normal 25.9133 SRR800043 sphere stage normal 24.4142 SRR1104058 heart normal 24.1881 SRR748488 sperm normal 24.0136 SRR1021215 sphere stage Mzeomesa 23.1193 SRR797914 embryo pbx2/4-MO 22.5803 SRR797911 embryo prdm1-/- 22.0154 SRR1569491 embryo normal 21.5316 SRR1004787 larvae impdh1a morpholino 21.5315 SRR797908 embryo normal 21.3763 SRR797917 embryo pbx2/4-MO and prdm1-/- 21.081 SRR1569495 embryo normal 20.9923 SRR800045 muscle normal 20.0603 SRR065196 3 dpf normal 19.6489 SRR891512 blood normal 18.8349 SRR658533 bud normal 18.5973 SRR658541 6 somite normal 18.4656 SRR038626 embryo control morpholino and bacterial infection 18.3636 SRR658547 6 somite Gata5/6 morphant 17.7423 SRR658537 bud Gata6 morphant 17.309 SRR658545 6 somite Gata6 morphant 17.1802 SRR658543 6 somite Gata5 morphan 16.607 SRR594771 endothelium normal 16.1188 SRR658535 bud Gata5 morphant 15.8593 SRR038625 embryo traf6 morpholino 15.7135 SRR726541 5 dpf infection with Mycobacterium marinum 15.6137 SRR1021213 sphere stage normal 15.5537 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 15.0904 SRR800049 sphere stage control treatment 14.6794 SRR800046 sphere stage 5azaCyD treatment 14.6541 SRR594769 blood normal 14.4887 SRR065197 3 dpf U1C knockout 14.4497 SRR726540 5 dpf normal 14.425 SRR527833 5 dpf normal 14.2813 SRR038624 embryo traf6 morpholino and bacterial infection 14.1452 SRR1048061 pineal gland dark 14.0151 SRR1048059 pineal gland light 13.8537 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 13.7971 SRR941753 posterior pectoral fin normal 13.7948 SRR1035239 liver transgenic mCherry control 13.6023 SRR658539 bud Gata5/6 morphant 13.6002 SRR1205160 5dpf transgenic sqET20 and GFP+ 13.5468 SRR038627 embryo control morpholino 13.4768 SRR592701 pineal gland normal 13.0851 SRR1647683 spleen SVCV treatment 13.0842 SRR1565813 brain normal 13.0159 SRR1565819 brain normal 12.9228 SRR527834 head normal 12.9127 SRR1205154 5dpf transgenic sqET20 12.6558 SRR1708343 embryo MUTAS 12.4964 SRR1565805 brain normal 12.4096 SRR527835 tail normal 12.2403 SRR1565809 brain normal 12.2202 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 12.1854 ERR594418 retina transgenic flk1 and develop tumors 12.1622 SRR1565811 brain normal 12.1589 SRR1565815 brain normal 11.877 SRR726542 5 dpf infection with control 11.8486 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 11.759 SRR592702 pineal gland normal 11.7441 SRR1523214 embryo glut12 morpholino 11.5986 SRR535986 larvae nhsl1b mut 11.5731 SRR1039573 gastrointestinal diet 0.75 NPM 11.3126 SRR700537 heart Gata4 morpholino 11.2979 SRR516134 skin male and 5 month 11.2594 SRR1039571 gastrointestinal diet 0.1 NPM 11.2132 SRR1565807 brain normal 11.2075 SRR1004786 larvae control morpholino 10.9126 SRR1647681 head kidney SVCV treatment 10.8443 SRR592699 pineal gland normal 10.7437 SRR1647684 spleen SVCV treatment 10.6831 SRR941749 anterior pectoral fin normal 10.5257 SRR372802 5 dpf normal 10.5184 SRR749514 24 hpf normal 10.2912 SRR1647679 head kidney normal 10.2107 SRR1028003 head normal 10.2032 SRR516130 skin male and 5 month 10.1659 SRR1188156 embryo Control PBS 4 hpi 10.1569 ERR594416 retina transgenic flk1 10.1202 SRR1028004 head normal 10.0688 SRR535978 larvae normal 10.0273 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 10.0136 SRR1188148 embryo Control PBS 0.5 hpi 9.881780000000001 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 9.88064 SRR535890 larvae normal 9.669369999999999 SRR1647680 head kidney SVCV treatment 9.66693 SRR516131 skin male and 5 month 9.37833 SRR527832 16-36 hpf normal 9.29449 SRR1028002 head normal 9.28357 SRR633544 larvae exposed to cold stress 9.00929 SRR1188152 embryo Insulin 0.5 hpi 8.66057 SRR516122 skin male and 3.5 year 8.41821 SRR1565817 brain normal 8.125580000000001 SRR1035237 liver transgenic UHRF1 7.987089999999999 SRR516135 skin male and 5 month 7.967630000000001 SRR633550 larvae exposed to hypoxia stress 7.65412 SRR1188160 embryo Insulin 4 hpi 7.63112 SRR633516 larvae normal 7.63052 SRR891495 heart normal 7.56853 SRR1647682 spleen normal 7.52608 SRR700534 heart control morpholino 7.43095 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 7.32048 SRR519717 2 dpf FETOH treatment 7.304530000000001 SRR1004785 larvae normal 7.294919999999999 SRR516127 skin male and 5 month 7.22457 SRR1291414 5 dpi normal 7.06363 SRR516123 skin male and 3.5 year 7.04953 SRR1004788 larvae impdh1b morpholino 7.00975 SRR516125 skin male and 3.5 year 6.9262 SRR592698 pineal gland normal 6.82723 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 6.82602 SRR535943 larvae vangl mut 6.7462100000000005 SRR1534349 larvae DMSO vehicle 6.68232 SRR592700 pineal gland normal 6.61355 SRR801556 embryo RPS19 and p53 morpholino 6.54124 ERR594417 retina normal 6.53522 SRR749515 24 hpf eif3ha morphant 6.20706 SRR535913 larvae krox mut 6.18726 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 6.07865 SRR891504 liver normal 5.86731 SRR1291417 5 dpi injected marinum 5.76216 SRR527840 24hpf normal 5.7232199999999995 SRR372798 28 hpf normal 5.70084 SRR1534350 larvae 5 ug/l BDE47 treatment 5.68899 SRR516128 skin male and 5 month 5.62934 SRR519747 6 dpf VD3 treatment 5.55941 SRR527836 24hpf normal 5.534590000000001 SRR519752 7 dpf VD3 treatment 5.48002 SRR1523211 embryo control morpholino 5.47739 SRR516129 skin male and 5 month 5.45509 SRR535848 larvae hoxb1b mut 5.41032 SRR1621206 embryo normal 5.35975 SRR372800 2 dpf normal 5.2773900000000005 SRR519732 7 dpf FETOH treatment 5.21704 SRR1005530 embryo RPL11 morpholino 5.1701 SRR372791 dome normal 5.16664 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 5.11245 SRR831692 embryo normal 5.0471 SRR776510 embryo Salmonella infected and miR-146 knockdown 4.98792 SRR535849 larvae normal 4.9455 SRR535851 larvae normal 4.86327 SRR610740 3 dpf normal 4.79948 SRR519737 2 dpf VD3 treatment 4.77637 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 4.66717 SRR516133 skin male and 5 month 4.63298 SRR519742 4 dpf VD3 treatment 4.61102 SRR516126 skin male and 5 month 4.6054900000000005 SRR1167763 embryo ptpn6 morpholino and bacterial infection 4.28774 SRR1534351 larvae 500 ug/l BDE47 treatment 4.254980000000001 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 4.24072 SRR519727 6 dpf FETOH treatment 4.157719999999999 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 3.98755 SRR1648855 brain normal 3.9006300000000005 SRR519722 4 dpf FETOH treatment 3.85135 SRR535852 larvae hoxb1b mut 3.6962800000000002 SRR1562532 spleen normal 3.6709400000000003 SRR610742 3 dpf express NICD 3.63142 SRR516124 skin male and 3.5 year 3.6186800000000003 SRR1562530 liver normal 3.61815 SRR1049814 256 cell normal 3.55735 SRR527844 24hpf normal 3.45971 SRR535926 larvae normal 3.4396699999999996 SRR1167762 embryo ptpn6 morpholino 3.37889 SRR748490 1 kcell normal 3.3553599999999997 SRR535847 larvae normal 3.34588 SRR592703 pineal gland normal 3.3445699999999996 SRR776507 embryo normal 3.25314 ERR023146 head kidney normal 3.22975 SRR1562529 intestine and pancreas normal 3.00041 SRR372789 1K cell normal 2.99307 ERR023145 heart normal 2.87216 SRR535850 larvae hoxb1b mut 2.7389099999999997 SRR748491 germ ring normal 2.67057 SRR1562531 muscle normal 2.48468 SRR372796 bud normal 2.47306 SRR1562528 eye normal 2.41343 SRR886456 256 cell 4-thio-UTP metabolic labeling 2.38994 SRR1648854 brain normal 2.3408700000000002 SRR630464 5 dpf injected epidermidis 2.20052 SRR1342218 embryo marco morpholino 2.15276 SRR1167752 embryo normal 2.1301400000000004 SRR516121 skin male and 3.5 year 2.1101 SRR891511 brain normal 2.076 SRR610741 3 dpf express Ras 2.01559 SRR942764 embryo myd88-/- 2.00631 SRR776508 embryo miR-146 knockdown 1.9089 SRR516132 skin male and 5 month 1.78423 SRR1708346 embryo SIBPS 1.65002 SRR1342217 embryo infection with Mycobacterium marinum 1.58155 SRR886455 128 cell 4-thio-UTP metabolic labeling 1.5799299999999998 ERR023143 swim bladder normal 1.34249 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 1.2369 SRR372787 2-4 cell normal 0.996547 SRR942769 embryo myd88+/+ 0.905724 ERR023144 brain normal 0.820744 SRR630463 5 dpf normal 0.808033 SRR1708344 embryo MUTPS 0.75375 SRR957180 heart 7 days after heart tip amputation 0.653092 SRR886457 512 cell 4-thio-UTP metabolic labeling 0.644388 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 0.6389130000000001 SRR1167753 embryo bacterial infection 0.5465369999999999 SRR372793 shield normal 0.483849 SRR957181 heart normal 0.478126 SRR1342216 embryo norml 0.44435399999999997 SRR1648856 brain normal 0.256235 SRR891510 muscle normal 0.254195 SRR776509 embryo Salmonella infected 0.230456 SRR1167757 embryo mpeg1 morpholino and bacterial infection 0.0267414 SRR801555 embryo RPS19 morpholino 0.00441641 SRR748489 egg normal 0.00235136 SRR1708345 embryo SIBAS 0.00205483 SRR1005529 embryo control morpholino 0.000989914