sample tissue condition fpkm SRR514030 retina id2a morpholino 67.0229 SRR1004787 larvae impdh1a morpholino 48.0698 SRR1299125 caudal fin Half day time after treatment 36.5348 SRR1004788 larvae impdh1b morpholino 35.5394 SRR801555 embryo RPS19 morpholino 30.4517 SRR801556 embryo RPS19 and p53 morpholino 30.2559 SRR1004786 larvae control morpholino 29.9859 SRR1569491 embryo normal 29.6573 SRR749515 24 hpf eif3ha morphant 29.3377 SRR514028 retina control morpholino 27.9604 SRR658537 bud Gata6 morphant 26.7528 SRR797917 embryo pbx2/4-MO and prdm1-/- 25.5472 SRR797914 embryo pbx2/4-MO 23.1913 SRR1562530 liver normal 22.659000000000002 SRR1562533 testis normal 22.6286 SRR1005530 embryo RPL11 morpholino 21.8702 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 21.3592 SRR658545 6 somite Gata6 morphant 20.8347 SRR658539 bud Gata5/6 morphant 19.4352 SRR1562529 intestine and pancreas normal 19.4203 SRR1039573 gastrointestinal diet 0.75 NPM 19.2064 SRR1569495 embryo normal 18.4105 SRR700537 heart Gata4 morpholino 18.2493 SRR891504 liver normal 18.1472 SRR797911 embryo prdm1-/- 17.5315 SRR658533 bud normal 17.4629 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 17.1613 SRR372793 shield normal 16.8753 SRR941753 posterior pectoral fin normal 16.732 SRR658543 6 somite Gata5 morphan 15.6953 SRR797908 embryo normal 15.2395 SRR658547 6 somite Gata5/6 morphant 14.6314 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 14.5235 SRR1004789 larvae impdh2 morpholino 14.3673 SRR594771 endothelium normal 14.0116 SRR658535 bud Gata5 morphant 12.9476 SRR1299129 caudal fin Seven days time after treatment 12.5694 SRR1035984 13 hpf normal 12.1742 SRR594769 blood normal 12.1314 SRR038627 embryo control morpholino 12.0505 SRR1039571 gastrointestinal diet 0.1 NPM 11.7593 SRR535978 larvae normal 11.4844 SRR1035981 13 hpf rx3+/+ or rx3+/- 11.4613 SRR1534351 larvae 500 ug/l BDE47 treatment 11.3569 SRR658541 6 somite normal 11.2542 SRR1647683 spleen SVCV treatment 11.1378 SRR1299126 caudal fin One day time after treatment 11.0681 SRR941749 anterior pectoral fin normal 10.9018 SRR1647680 head kidney SVCV treatment 10.5829 SRR1708343 embryo MUTAS 10.4381 SRR1035978 13 hpf rx3-/- 10.4339 SRR700534 heart control morpholino 10.1485 SRR1004785 larvae normal 10.0539 SRR1299127 caudal fin Two days time after treatment 9.9567 SRR748491 germ ring normal 9.779530000000001 SRR535986 larvae nhsl1b mut 9.6728 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 9.629430000000001 SRR516122 skin male and 3.5 year 9.6124 SRR749514 24 hpf normal 9.47087 SRR1291417 5 dpi injected marinum 9.39723 SRR1647679 head kidney normal 9.20325 SRR1534350 larvae 5 ug/l BDE47 treatment 8.87378 SRR372796 bud normal 8.8524 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 8.720939999999999 SRR1562532 spleen normal 8.67677 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 8.63602 SRR516125 skin male and 3.5 year 8.50942 SRR1647684 spleen SVCV treatment 8.341239999999999 SRR1647682 spleen normal 8.21675 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 8.0973 SRR535926 larvae normal 7.9654 SRR1205154 5dpf transgenic sqET20 7.89127 SRR1708346 embryo SIBPS 7.8804300000000005 SRR1708344 embryo MUTPS 7.81197 SRR1648856 brain normal 7.403169999999999 SRR776507 embryo normal 7.37573 SRR519752 7 dpf VD3 treatment 7.22432 SRR1534349 larvae DMSO vehicle 7.159269999999999 SRR1299128 caudal fin Three days time after treatment 7.15004 SRR516121 skin male and 3.5 year 6.96639 SRR1647681 head kidney SVCV treatment 6.96378 SRR535913 larvae krox mut 6.805439999999999 SRR516134 skin male and 5 month 6.76277 SRR535890 larvae normal 6.72014 SRR942769 embryo myd88+/+ 6.696330000000001 SRR610740 3 dpf normal 6.658739999999999 SRR1035239 liver transgenic mCherry control 6.56906 SRR527836 24hpf normal 6.4386 SRR776509 embryo Salmonella infected 6.432869999999999 SRR630464 5 dpf injected epidermidis 6.412380000000001 SRR1167763 embryo ptpn6 morpholino and bacterial infection 6.4076900000000006 ERR594418 retina transgenic flk1 and develop tumors 6.31131 SRR516133 skin male and 5 month 6.21799 SRR942764 embryo myd88-/- 6.07525 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 6.06149 SRR610741 3 dpf express Ras 5.94784 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 5.942880000000001 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 5.92456 SRR527844 24hpf normal 5.84629 SRR1299124 caudal fin Zero day time after treatment 5.79104 SRR748488 sperm normal 5.77801 SRR1167757 embryo mpeg1 morpholino and bacterial infection 5.76429 SRR527840 24hpf normal 5.73888 SRR038626 embryo control morpholino and bacterial infection 5.636 SRR630463 5 dpf normal 5.44855 SRR1188152 embryo Insulin 0.5 hpi 5.4349099999999995 SRR1005529 embryo control morpholino 5.42704 SRR801554 embryo control morpholino 5.418880000000001 SRR1205160 5dpf transgenic sqET20 and GFP+ 5.40966 SRR372798 28 hpf normal 5.20367 SRR1708345 embryo SIBAS 5.12425 ERR594417 retina normal 5.09055 SRR527834 head normal 5.00926 SRR1167762 embryo ptpn6 morpholino 4.90723 SRR1021215 sphere stage Mzeomesa 4.67557 SRR372791 dome normal 4.57425 SRR519717 2 dpf FETOH treatment 4.560219999999999 SRR065196 3 dpf normal 4.55818 SRR519747 6 dpf VD3 treatment 4.45593 SRR372800 2 dpf normal 4.42149 SRR1167753 embryo bacterial infection 4.40013 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 4.39884 SRR516123 skin male and 3.5 year 4.34834 SRR1562528 eye normal 4.33056 SRR1188160 embryo Insulin 4 hpi 4.3227400000000005 SRR065197 3 dpf U1C knockout 4.293830000000001 SRR516130 skin male and 5 month 4.262580000000001 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 4.2464699999999995 SRR519737 2 dpf VD3 treatment 4.20519 SRR891495 heart normal 4.15856 SRR535943 larvae vangl mut 4.14309 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 3.92196 SRR1188156 embryo Control PBS 4 hpi 3.8953900000000004 SRR1188148 embryo Control PBS 0.5 hpi 3.8858599999999996 SRR1523214 embryo glut12 morpholino 3.86734 SRR776508 embryo miR-146 knockdown 3.78024 ERR594416 retina transgenic flk1 3.6834599999999997 SRR519732 7 dpf FETOH treatment 3.6470800000000003 SRR1021213 sphere stage normal 3.5518699999999996 SRR372802 5 dpf normal 3.52083 SRR1167756 embryo mpeg1 morpholino 3.41926 SRR1035237 liver transgenic UHRF1 3.3380900000000002 SRR633544 larvae exposed to cold stress 3.31865 SRR776510 embryo Salmonella infected and miR-146 knockdown 3.23687 SRR038625 embryo traf6 morpholino 3.2240599999999997 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 3.1896400000000003 SRR519722 4 dpf FETOH treatment 3.16787 SRR535851 larvae normal 3.16193 SRR1342217 embryo infection with Mycobacterium marinum 3.13052 SRR1104059 heart kctd10 mut 3.11675 SRR633550 larvae exposed to hypoxia stress 3.08554 SRR038624 embryo traf6 morpholino and bacterial infection 3.00654 SRR1167752 embryo normal 3.00431 SRR891510 muscle normal 2.9936700000000003 SRR1562531 muscle normal 2.9912099999999997 SRR516127 skin male and 5 month 2.99001 SRR610742 3 dpf express NICD 2.9788 SRR1028002 head normal 2.96883 SRR1104058 heart normal 2.967 ERR023144 brain normal 2.91708 SRR1291414 5 dpi normal 2.89358 SRR519727 6 dpf FETOH treatment 2.8834299999999997 SRR1565819 brain normal 2.8167 SRR1565813 brain normal 2.80898 SRR535847 larvae normal 2.75758 SRR1523211 embryo control morpholino 2.71705 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 2.58696 ERR023146 head kidney normal 2.5802099999999997 SRR535850 larvae hoxb1b mut 2.43961 SRR1342216 embryo norml 2.40599 SRR519742 4 dpf VD3 treatment 2.3401400000000003 ERR023145 heart normal 2.30057 SRR633516 larvae normal 2.28572 SRR1648854 brain normal 2.2848599999999997 SRR516128 skin male and 5 month 2.2694 SRR1565805 brain normal 2.19529 SRR535852 larvae hoxb1b mut 2.1667799999999997 SRR1342218 embryo marco morpholino 2.07021 SRR726540 5 dpf normal 2.0029 SRR891512 blood normal 1.9726400000000002 SRR535849 larvae normal 1.89576 SRR527835 tail normal 1.87115 SRR726542 5 dpf infection with control 1.8195 ERR023143 swim bladder normal 1.78935 SRR1565815 brain normal 1.78331 SRR726541 5 dpf infection with Mycobacterium marinum 1.7456900000000002 SRR1048059 pineal gland light 1.67566 SRR535848 larvae hoxb1b mut 1.6627599999999998 SRR1565809 brain normal 1.60761 SRR1028004 head normal 1.59647 SRR527833 5 dpf normal 1.5166 SRR1565811 brain normal 1.4832 SRR592700 pineal gland normal 1.46517 SRR1048061 pineal gland dark 1.39669 SRR1028003 head normal 1.39058 SRR800045 muscle normal 1.38185 SRR1565807 brain normal 1.36917 SRR1565817 brain normal 1.3535 SRR831692 embryo normal 1.2925200000000001 SRR527832 16-36 hpf normal 1.21482 SRR516129 skin male and 5 month 1.14856 SRR592703 pineal gland normal 0.9498139999999999 SRR592702 pineal gland normal 0.9031629999999999 SRR592699 pineal gland normal 0.8863770000000001 SRR592701 pineal gland normal 0.8786579999999999 SRR516124 skin male and 3.5 year 0.8748819999999999 SRR516131 skin male and 5 month 0.863671 SRR800043 sphere stage normal 0.79345 SRR800046 sphere stage 5azaCyD treatment 0.776179 SRR516126 skin male and 5 month 0.7181890000000001 SRR516135 skin male and 5 month 0.717303 SRR1648855 brain normal 0.584288 SRR592698 pineal gland normal 0.576839 SRR748489 egg normal 0.357258 SRR891511 brain normal 0.34830900000000004 SRR957181 heart normal 0.21260500000000002 SRR957180 heart 7 days after heart tip amputation 0.157529 SRR1621206 embryo normal 0.0940719 SRR372787 2-4 cell normal 0.08783930000000001 SRR1049814 256 cell normal 0.0215453 SRR886457 512 cell 4-thio-UTP metabolic labeling 0.00790869 SRR886455 128 cell 4-thio-UTP metabolic labeling 0.00433078 SRR886456 256 cell 4-thio-UTP metabolic labeling 0.00420003