sample tissue condition fpkm SRR748489 egg normal 218.347 SRR372787 2-4 cell normal 180.929 SRR886455 128 cell 4-thio-UTP metabolic labeling 73.087 SRR886456 256 cell 4-thio-UTP metabolic labeling 65.4251 SRR1569491 embryo normal 58.2979 SRR1021213 sphere stage normal 57.207 SRR886457 512 cell 4-thio-UTP metabolic labeling 56.6825 SRR1049814 256 cell normal 47.0004 SRR1648856 brain normal 45.94 SRR776507 embryo normal 45.041000000000004 SRR372789 1K cell normal 44.6954 SRR535978 larvae normal 39.7331 SRR1021215 sphere stage Mzeomesa 39.4203 SRR527835 tail normal 38.1386 SRR776510 embryo Salmonella infected and miR-146 knockdown 37.7952 SRR372796 bud normal 37.1904 SRR776508 embryo miR-146 knockdown 36.7443 SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 36.3251 SRR527840 24hpf normal 35.6446 SRR594771 endothelium normal 35.3294 SRR372798 28 hpf normal 35.0224 SRR372800 2 dpf normal 34.5157 SRR776509 embryo Salmonella infected 33.5477 SRR535986 larvae nhsl1b mut 33.3809 ERR145648 skeletal muscle 27 degree_C to 27 degree_C 33.2723 SRR594769 blood normal 33.0973 ERR145631 skeletal muscle 32 degree_C to 16 degree_C 32.4647 SRR1569495 embryo normal 31.6222 SRR1004785 larvae normal 30.0879 SRR527844 24hpf normal 29.0018 SRR527836 24hpf normal 28.9814 ERR145635 skeletal muscle 27 degree_C to 16 degree_C 28.7586 SRR1004786 larvae control morpholino 28.1412 SRR514028 retina control morpholino 28.1148 SRR1648855 brain normal 27.6261 SRR748488 sperm normal 27.5581 SRR372791 dome normal 27.4669 SRR1049946 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with DMSO 27.2059 SRR514030 retina id2a morpholino 27.1677 SRR1708345 embryo SIBAS 27.1647 SRR1708343 embryo MUTAS 26.8689 SRR891511 brain normal 26.6321 ERR145646 skeletal muscle 32 degree_C to 27 degree_C 26.3262 SRR797911 embryo prdm1-/- 26.1875 SRR1648854 brain normal 25.9939 SRR519737 2 dpf VD3 treatment 25.4228 SRR1621206 embryo normal 25.160999999999998 SRR519717 2 dpf FETOH treatment 24.8014 SRR797908 embryo normal 24.4152 SRR797914 embryo pbx2/4-MO 24.1827 SRR700534 heart control morpholino 24.0274 SRR1004788 larvae impdh1b morpholino 23.9752 SRR038627 embryo control morpholino 23.6724 SRR700537 heart Gata4 morpholino 23.6301 SRR1523211 embryo control morpholino 23.5947 SRR065196 3 dpf normal 23.0465 SRR038625 embryo traf6 morpholino 22.9808 SRR535890 larvae normal 22.2773 SRR1205172 5dpf transgenic sqET20 and neomycin treated 5h 22.0476 SRR535943 larvae vangl mut 21.9516 SRR797917 embryo pbx2/4-MO and prdm1-/- 21.7637 SRR1291414 5 dpi normal 20.5933 SRR1708346 embryo SIBPS 20.4597 SRR749514 24 hpf normal 20.3587 SRR1291417 5 dpi injected marinum 20.2609 SRR535926 larvae normal 20.0602 SRR1104058 heart normal 20.0099 SRR658547 6 somite Gata5/6 morphant 19.9218 SRR658541 6 somite normal 19.2998 SRR630464 5 dpf injected epidermidis 19.0948 SRR535913 larvae krox mut 18.8487 SRR658543 6 somite Gata5 morphan 18.7758 SRR630463 5 dpf normal 18.2499 SRR1205154 5dpf transgenic sqET20 18.1534 SRR1708344 embryo MUTPS 18.0445 SRR1562533 testis normal 17.9342 SRR891510 muscle normal 17.854 ERR023143 swim bladder normal 17.4615 SRR658533 bud normal 17.3746 SRR038624 embryo traf6 morpholino and bacterial infection 17.227 SRR372793 shield normal 17.2063 SRR516135 skin male and 5 month 17.1313 SRR519742 4 dpf VD3 treatment 16.9078 SRR658539 bud Gata5/6 morphant 16.9074 SRR1188160 embryo Insulin 4 hpi 16.7134 SRR1104059 heart kctd10 mut 16.6278 SRR038626 embryo control morpholino and bacterial infection 16.6132 SRR1188148 embryo Control PBS 0.5 hpi 16.5641 SRR749515 24 hpf eif3ha morphant 16.4082 SRR1565813 brain normal 16.3527 SRR658545 6 somite Gata6 morphant 16.3261 SRR658535 bud Gata5 morphant 16.2078 SRR1205151 5dpf transgenic sqET20 and neomycin treated 1h 16.1584 SRR1205166 5dpf transgenic sqET20 and neomycin treated 3h 16.0402 SRR065197 3 dpf U1C knockout 16.0101 SRR1647679 head kidney normal 16.0012 SRR1004787 larvae impdh1a morpholino 15.6642 SRR1005529 embryo control morpholino 15.5389 SRR801554 embryo control morpholino 15.5155 SRR1299126 caudal fin One day time after treatment 15.5058 SRR1167756 embryo mpeg1 morpholino 15.373 SRR1299128 caudal fin Three days time after treatment 15.3524 SRR1523214 embryo glut12 morpholino 15.3073 SRR1167752 embryo normal 15.2535 SRR1167763 embryo ptpn6 morpholino and bacterial infection 15.2125 SRR1035237 liver transgenic UHRF1 15.2038 SRR519722 4 dpf FETOH treatment 15.0845 SRR1167757 embryo mpeg1 morpholino and bacterial infection 15.0296 SRR891495 heart normal 15.0106 SRR1565819 brain normal 14.9886 SRR519747 6 dpf VD3 treatment 14.8456 SRR527832 16-36 hpf normal 14.77 ERR023144 brain normal 14.6866 SRR1342216 embryo norml 14.6836 SRR592698 pineal gland normal 14.6795 SRR1188152 embryo Insulin 0.5 hpi 14.6293 SRR1299129 caudal fin Seven days time after treatment 14.4768 SRR1342218 embryo marco morpholino 14.3845 SRR519752 7 dpf VD3 treatment 14.3295 SRR942772 embryo myd88+/+ and infection with Mycobacterium marinum 14.21 SRR516125 skin male and 3.5 year 14.1922 SRR942769 embryo myd88+/+ 14.0011 ERR594418 retina transgenic flk1 and develop tumors 13.9443 SRR800049 sphere stage control treatment 13.8459 SRR748490 1 kcell normal 13.831 SRR1565811 brain normal 13.8248 SRR1565809 brain normal 13.7826 SRR891512 blood normal 13.7256 SRR1167762 embryo ptpn6 morpholino 13.7116 SRR1167753 embryo bacterial infection 13.6663 SRR372802 5 dpf normal 13.657 SRR519727 6 dpf FETOH treatment 13.6247 SRR516131 skin male and 5 month 13.6196 SRR1205163 5dpf transgenic sqET20 and neomycin treated 3h and GFP+ 13.5388 SRR942764 embryo myd88-/- 13.4978 SRR519732 7 dpf FETOH treatment 13.4486 SRR1205157 5dpf transgenic sqET20 and neomycin treated 1h and GFP+ 13.355 SRR1205169 5dpf transgenic sqET20 and neomycin treated 5h and GFP+ 13.3409 SRR592703 pineal gland normal 13.25 SRR800045 muscle normal 13.0975 SRR1005530 embryo RPL11 morpholino 13.0925 SRR1299124 caudal fin Zero day time after treatment 13.0816 SRR1004789 larvae impdh2 morpholino 13.0165 SRR592700 pineal gland normal 12.9682 SRR1565815 brain normal 12.9451 ERR023146 head kidney normal 12.8082 SRR957181 heart normal 12.7403 SRR610740 3 dpf normal 12.5863 SRR1565807 brain normal 12.4957 SRR1565805 brain normal 12.487 SRR1299127 caudal fin Two days time after treatment 12.4643 SRR1647681 head kidney SVCV treatment 12.4635 SRR726542 5 dpf infection with control 12.3715 SRR1205160 5dpf transgenic sqET20 and GFP+ 12.3244 SRR1565817 brain normal 12.2823 SRR516128 skin male and 5 month 12.2767 SRR1562531 muscle normal 12.1447 SRR800043 sphere stage normal 12.1184 SRR800046 sphere stage 5azaCyD treatment 11.9871 ERR594416 retina transgenic flk1 11.9235 SRR1342219 embryo marco morpholino and infection with Mycobacterium marinum 11.7445 SRR748491 germ ring normal 11.4666 SRR1035981 13 hpf rx3+/+ or rx3+/- 11.35 SRR1035978 13 hpf rx3-/- 11.2729 SRR831692 embryo normal 11.1852 SRR801556 embryo RPS19 and p53 morpholino 11.1648 SRR516123 skin male and 3.5 year 10.8926 SRR1647680 head kidney SVCV treatment 10.8785 SRR516121 skin male and 3.5 year 10.6867 SRR658537 bud Gata6 morphant 10.6626 SRR516124 skin male and 3.5 year 10.5981 SRR726540 5 dpf normal 10.5332 SRR516122 skin male and 3.5 year 10.44 SRR942767 embryo myd88-/- and infection with Mycobacterium marinum 10.4043 SRR610742 3 dpf express NICD 10.3725 SRR1647683 spleen SVCV treatment 10.2489 SRR1562528 eye normal 10.121 SRR1647682 spleen normal 10.0273 SRR516132 skin male and 5 month 10.0039 SRR592701 pineal gland normal 9.98307 SRR1188156 embryo Control PBS 4 hpi 9.93861 SRR527833 5 dpf normal 9.90934 SRR516126 skin male and 5 month 9.88267 SRR516127 skin male and 5 month 9.81634 SRR592702 pineal gland normal 9.783719999999999 ERR594417 retina normal 9.771510000000001 SRR516130 skin male and 5 month 9.68189 SRR535848 larvae hoxb1b mut 9.68182 SRR801555 embryo RPS19 morpholino 9.57599 SRR1035984 13 hpf normal 9.49293 SRR516134 skin male and 5 month 9.39435 SRR535852 larvae hoxb1b mut 9.248660000000001 SRR957180 heart 7 days after heart tip amputation 9.22633 SRR535850 larvae hoxb1b mut 9.017439999999999 SRR1562532 spleen normal 8.91642 SRR1647684 spleen SVCV treatment 8.83887 SRR592699 pineal gland normal 8.82893 SRR535851 larvae normal 8.81535 SRR726541 5 dpf infection with Mycobacterium marinum 8.795169999999999 SRR633550 larvae exposed to hypoxia stress 8.7688 SRR1048061 pineal gland dark 8.56104 SRR633544 larvae exposed to cold stress 8.399610000000001 SRR516133 skin male and 5 month 8.36908 SRR516129 skin male and 5 month 8.35177 SRR1342217 embryo infection with Mycobacterium marinum 7.9779 SRR1035239 liver transgenic mCherry control 7.88232 SRR1048059 pineal gland light 7.82339 SRR1299125 caudal fin Half day time after treatment 7.80996 SRR633516 larvae normal 7.7664 ERR023145 heart normal 7.49202 SRR535847 larvae normal 7.3909 SRR1534349 larvae DMSO vehicle 7.2835600000000005 SRR535849 larvae normal 7.213080000000001 SRR1534350 larvae 5 ug/l BDE47 treatment 6.798589999999999 SRR1534351 larvae 500 ug/l BDE47 treatment 6.79438 SRR1028003 head normal 6.7377199999999995 SRR610741 3 dpf express Ras 6.45423 SRR1028004 head normal 6.398 SRR527834 head normal 6.18951 SRR1028002 head normal 5.79608 SRR1562529 intestine and pancreas normal 4.93447 SRR1039571 gastrointestinal diet 0.1 NPM 4.930619999999999 SRR941749 anterior pectoral fin normal 4.92938 SRR941753 posterior pectoral fin normal 4.7914699999999995 SRR891504 liver normal 3.95683 SRR1562530 liver normal 3.64402 SRR1039573 gastrointestinal diet 0.75 NPM 3.46805 SRR800037 egg normal 2.52006