LncRNA Gene

ZFLNCG11400

Basic Information

Chromesome: chr21

Start: 2573311

End: 2574317

Transcript: ZFLNCT17659 ZFLNCT17660

Known as: LOC103909398

Genome Browser
Express profile Download
Express in top 10 samples
Sample Tissue Condition FPKM
ERR023145 heart normal 41.71
ERR023143 swim bladder normal 39.33
ERR023144 brain normal 35.98
SRR1648856 brain normal 27.32
SRR1049952 embryo transgenic TgOMP-Gal4 and UAS-GCaMP1.6 and treated with gallein 25.61
ERR023146 head kidney normal 22.73
SRR514028 retina control morpholino 18.40
SRR1648854 brain normal 18.26
SRR535978 larvae normal 16.84
SRR1708345 embryo SIBAS 15.97
Express in tissues
Correlated coding gene Download
gene correlation coefficent
LOC100004941 0.67
rab2a 0.67
ptmaa 0.67
zgc:175214 0.66
ube2e3 0.66
snx12 0.66
cdc42 0.66
vps52 0.65
ap2s1 0.65
acbd6 0.65
Gene Ontology Download
GO P value
GO:0007156 1.30e-06
GO:0098742 2.12e-06
GO:0008152 4.15e-06
GO:0071704 1.22e-05
GO:0044238 1.35e-05
GO:0043170 9.35e-05
GO:0044237 1.12e-04
GO:0007019 1.66e-04
GO:0098609 1.69e-04
GO:0019538 1.81e-04
GO:0005886 2.51e-06
GO:0016471 2.09e-03
GO:0033176 2.09e-03
GO:0016469 2.09e-03
GO:0044464 3.19e-03
GO:0043005 4.13e-03
GO:0005834 8.65e-03
GO:0098796 9.16e-03
GO:0030424 1.29e-02
GO:0061673 1.47e-02
GO:0005509 1.88e-04
GO:0005515 3.15e-04
GO:0003824 4.28e-04
GO:0005200 5.27e-04
GO:0005525 1.03e-03
GO:0005524 1.12e-03
GO:0032559 1.13e-03
GO:0030554 1.13e-03
GO:0032561 1.43e-03
GO:0019001 1.47e-03
KEGG Pathway Download
KO P value
ko04114 1.42e-05
ko04720 4.68e-05
ko04722 4.80e-05
ko04626 7.84e-05
ko04745 1.34e-04
ko05031 1.94e-04
ko04014 3.05e-04
ko05130 5.29e-04
ko05214 6.07e-04
ko04728 7.56e-04
Conservation
Zebrafish lncRNA Transcript Human lncRNA Transcript Mouse lncRNA Transcript Methods
ZFLNCT17659 ENST00000614138; ENST00000500612; ENST00000446262; ENST00000594562; ENST00000588382; ENST00000592296; ENST00000599190; ENST00000634951; ENST00000567341; ENST00000363309; ENST00000598561; ENST00000469492; ENST00000591177; ENST00000593270; ENST00000595422; ENST00000590111; ENST00000496160; ENST00000569091; ENST00000594379; ENST00000383942; ENST00000589671; ENST00000384113; ENST00000587121; ENST00000612939; ENST00000592087; ENST00000634630; ENST00000600253; ENST00000595010; ENST00000412789; rna119528; rna122103; rna119680; rna123184; rna119562; rna120635; rna119534; rna122291; rna118615; rna69739; NONHSAT066004; NONHSAT180384; NONHSAT066009; NONHSAT143480; NONHSAT066052; NONHSAT067510; NONHSAT068239; NONHSAT179928; NONHSAT032161; NONHSAT066011; NONHSAT066053; NONHSAT179918; NONHSAT066006; NONHSAT179932; NONHSAT060961; NONHSAT067638; NONHSAT180621; NONHSAT180395; NONHSAT067500; NONHSAT066059; NONHSAT180564; NONHSAT180620; NONHSAT179990; NONHSAT067512; NONHSAT068124; NONHSAT067497; NONHSAT066677; NONHSAT063743; NONHSAT066145; NONHSAT180382; NONHSAT068313; NONHSAT067639; NONHSAT066010; NONHSAT067498; NONHSAT068255; NONHSAT067499; NONHSAT067509; NONHSAT179716; NONHSAT068125; NONHSAT068312; NONHSAT066141; NONHSAT143481; NONHSAT179931; NONHSAT032163; NONHSAT179719; NONHSAT067637; NONHSAT066142; NONHSAT012799; NONHSAT067508; NONHSAT179920; NONHSAT180618; NONHSAT173232; NONHSAT155389; NONHSAT067693; NONHSAT068238; NONHSAT068259; NONHSAT032162; NONHSAT179786; ENSMUST00000180846; ENSMUST00000205272; rna40907; rna39617; rna39612; NONMMUT060396; NONMMUT054960; NONMMUT068237; NONMMUT126426; NONMMUT068232; NONMMUT126427; NONMMUT122901; NONMMUT068239; NONMMUT124878; NONMMUT060530; NONMMUT009632; NONMMUT029150; NONMMUT068235; NONMMUT126588; NONMMUT126529; NONMMUT122900; NONMMUT068236; NONMMUT060538; NONMMUT126530; NONMMUT068229; NONMMUT132117; NONMMUT060539; NONMMUT124678; NONMMUT029153; NONMMUT122898; NONMMUT122899; NONMMUT060997; NONMMUT068226; NONMMUT068238; NONMMUT126528; Collinearity with conserved coding gene
ZFLNCT17660 ENST00000614138; ENST00000500612; ENST00000446262; ENST00000594562; ENST00000588382; ENST00000592296; ENST00000599190; ENST00000634951; ENST00000567341; ENST00000363309; ENST00000598561; ENST00000469492; ENST00000591177; ENST00000593270; ENST00000595422; ENST00000590111; ENST00000496160; ENST00000569091; ENST00000594379; ENST00000383942; ENST00000589671; ENST00000384113; ENST00000587121; ENST00000612939; ENST00000592087; ENST00000634630; ENST00000600253; ENST00000595010; ENST00000412789; rna119528; rna122103; rna119680; rna123184; rna119562; rna120635; rna119534; rna122291; rna118615; rna69739; NONHSAT066004; NONHSAT180384; NONHSAT066009; NONHSAT143480; NONHSAT066052; NONHSAT067510; NONHSAT068239; NONHSAT179928; NONHSAT032161; NONHSAT066011; NONHSAT066053; NONHSAT179918; NONHSAT066006; NONHSAT179932; NONHSAT060961; NONHSAT067638; NONHSAT180621; NONHSAT180395; NONHSAT067500; NONHSAT066059; NONHSAT180564; NONHSAT180620; NONHSAT179990; NONHSAT067512; NONHSAT068124; NONHSAT067497; NONHSAT066677; NONHSAT063743; NONHSAT066145; NONHSAT180382; NONHSAT068313; NONHSAT067639; NONHSAT066010; NONHSAT067498; NONHSAT068255; NONHSAT067499; NONHSAT067509; NONHSAT179716; NONHSAT068125; NONHSAT068312; NONHSAT066141; NONHSAT143481; NONHSAT179931; NONHSAT032163; NONHSAT179719; NONHSAT067637; NONHSAT066142; NONHSAT012799; NONHSAT067508; NONHSAT179920; NONHSAT180618; NONHSAT173232; NONHSAT155389; NONHSAT067693; NONHSAT068238; NONHSAT068259; NONHSAT032162; NONHSAT179786; ENSMUST00000180846; ENSMUST00000205272; rna40907; rna39617; rna39612; NONMMUT060396; NONMMUT054960; NONMMUT068237; NONMMUT126426; NONMMUT068232; NONMMUT126427; NONMMUT122901; NONMMUT068239; NONMMUT124878; NONMMUT060530; NONMMUT009632; NONMMUT029150; NONMMUT068235; NONMMUT126588; NONMMUT126529; NONMMUT122900; NONMMUT068236; NONMMUT060538; NONMMUT126530; NONMMUT068229; NONMMUT132117; NONMMUT060539; NONMMUT124678; NONMMUT029153; NONMMUT122898; NONMMUT122899; NONMMUT060997; NONMMUT068226; NONMMUT068238; NONMMUT126528; Collinearity with conserved coding gene
OMIM

OMIM of this lncRNA gene hava does not exist!

Sequence Download
>ZFLNCG11400
ATATTTATTTATTTATATATATATATTTTCTTTTTTCATTCCTTATAAACTTGTTTTAACCCATTAAAAC
AGATTAGAAGGGTGTTAAAACAGGTTTGAAAGGAGGGGAAATTACACCAATATATAGAAAAACATAGTTG
TTATAGTTGTACTTTATATTCCTTTTATTTAATTTTTTTAACTAAAGCACATTGAATTATCCTGGTTTGT
TTTAAATAGTATATGTTATATATATATATATATATATATATATATATATATATATATATATATATATATA
TATATTTATATATATATATTTTCTTTTTTCATTCCTTATAAACTTGTTTTAACCCATTAAAACAGATTAG
AAGGGTGTTAAAACAGGTTTGAAAAGAGGGGAAATTACACCAATATATAGAAAAACATAGTTGTTATTTT
TATTTCTTATACTTGTTGTATTTAATAGTTCATTTATACTTGTTTATGTAAAGCACTTTGAGTTACAATT
ACCTATGAAATGTGCTATATGAATAAACATGCCTTGCCTTGCTATATTTCTCCCAGTAAAGCAGTTTGCA
TTAATAACACGCTGCCTTAATTTATTCTGATTGGTCATCTAACTTTTCCGTATATAGTTTCCCAGATATT
AATTGCTAAAACTAATAACACAGGCTCATCTGAGTACTTTGAATCATCCTGGCTGTCTGTAAATCCATTC
ACTCCCATATTTATATGCTTGTTACTGCTGTTTTTGAGTGTTTGGCGCCATCTAGTGTCTGAATAATACG
TAGGTTAGTGTTTGCTCCATTCAGCCGTTTTCATTTCTTTCAGCTTTGCCTTTAATTGAAGAATTAATAA
ACTCTTATGGCTGAGAACAATGTTTTGTGTCTTTTTTGTGTTAAGTAGCCATGCAATAAGTGGGATAAAG
TACATCCAGATGGTTTTCACAGAATAAGGCCCTTCAGTCTTATTAACTTATGTAAATATAGTCTTTGTAG
AGGATTTATTCTGCGATGAGAGCATT